chr15 : 96,970,160 96,970,698
538 bp 87 TFs 0 linked genes
This 538 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:96,965,160 – 96,975,698
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP GM12878 ENCFF066HPG 67 bp overlap
BARX2 1 dataset
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCFF854PAY 125 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 123 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 99 bp overlap
BRD4 7 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 314 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 355 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 137 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 327 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 439 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 159 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 264 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 241 bp overlap
ChIP K562 ENCFF673OEZ 383 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 87 bp overlap
EBF1 1 dataset
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 316 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 201 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 1 dataset
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FOXA1 2 datasets
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 283 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 239 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 435 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 57 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 236 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 191 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 177 bp overlap
GATA2 1 dataset
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
GATA3 5 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 387 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 305 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 258 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 308 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 226 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 416 bp overlap
ChIP DE DE-GATA4-2 429 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 392 bp overlap
ChIP foregut GSE117136.GATA4.foregut 346 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 293 bp overlap
ChIP AGS GSE51936.GATA6.AGS 119 bp overlap
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 464 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 480 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 470 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 489 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 538 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 526 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 500 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 485 bp overlap
ChIP foregut GSE117136.GATA6.foregut 413 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 479 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Gli1 1 dataset
Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 205 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 173 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 470 bp overlap
HOXC12 1 dataset
Motif DE_36h DE_36h-HOXC12_MA0906.2 10 bp overlap
IKZF2 2 datasets
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 318 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 272 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 289 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 357 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 248 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 416 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 280 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 100 bp overlap
ChIP HepG2 ENCFF701PYP 113 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 223 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 342 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 430 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 368 bp overlap
Mecom 1 dataset
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
PATZ1 1 dataset
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 337 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 108 bp overlap
PAX6 1 dataset
Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 332 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF309IKZ 75 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 94 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 381 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
REST 2 datasets
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 120 bp overlap
ChIP neural cell ENCFF882LXX 107 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 538 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 538 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 228 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 288 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 181 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 210 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 538 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 108 bp overlap
SRY 1 dataset
Motif DE_36h DE_36h-SRY_MA0084.2 7 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 210 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 319 bp overlap
TAL1 4 datasets
ChIP Jurkat GSE29180.TAL1.Jurkat 210 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 184 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 179 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 343 bp overlap
TARDBP 2 datasets
ChIP K-562 GSE120104.TARDBP.K-562 253 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 154 bp overlap
TBX18 1 dataset
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 209 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 365 bp overlap
TCF7L2 2 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 476 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 321 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 280 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 186 bp overlap
ZNF16 1 dataset
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
ZNF257 1 dataset
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF652 1 dataset
Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 157 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 97 bp overlap