chr15 : 55,417,688 55,418,132
444 bp 102 TFs 2 linked genes
This 444 bp open chromatin element is linked to PIERCE2 and CCPG1 and is bound by 102 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PIERCE2 9.1 kb Proximal Proximity
CCPG1 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:55,412,688 – 55,423,132
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 444 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BCL6B 3 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CEBPA 2 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 217 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
GATA6 1 dataset
ChIP DE_D1 S09-DE-d1-GATA6-exp1 261 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 291 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HIF1A 1 dataset
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
HNF4A 1 dataset
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 63 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 3 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
Motif DE_48h DE_48h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hoxa13 4 datasets
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_48h DE_48h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF348IBL 280 bp overlap
ChIP K562 ENCFF771OHZ 317 bp overlap
INSM1 2 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 107 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 411 bp overlap
KLF1 3 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCFF159QSW 181 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 161 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 180 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 164 bp overlap
NFATC3 3 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NFATC4 3 datasets
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap
Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 3 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap
NR2F1 4 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap
Motif DE_24h DE_24h-NR2F1_MA1537.2 13 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Nfat5 3 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 3 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 3 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Nr2f6 2 datasets
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 276 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 162 bp overlap
PPARD 2 datasets
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Motif DE_24h DE_24h-PPARD_MA1550.2 14 bp overlap
PPARG 3 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif DE_24h DE_24h-PPARG_MA0066.2 19 bp overlap
Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_24h DE_24h-PpargRxra_MA0065.3 13 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
RXRB 2 datasets
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
Motif DE_24h DE_24h-RXRB_MA0855.1 14 bp overlap
RXRG 2 datasets
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Motif DE_24h DE_24h-RXRG_MA0856.1 14 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_24h DE_24h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
Rxra 2 datasets
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
Motif DE_24h DE_24h-Rxra_MA0512.2 14 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 286 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 98 bp overlap
SPI1 3 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 71 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 55 bp overlap
ChIP K562 ENCFF410ORC 105 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBP 3 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap
Motif DE_48h DE_48h-TBP_MA0108.3 7 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Motif DE_24h DE_24h-THRB_MA1574.2 13 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 95 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 260 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
ZNF784 3 datasets
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
Motif DE_24h DE_24h-ZNF784_MA1717.2 8 bp overlap
Motif DE_48h DE_48h-ZNF784_MA1717.2 8 bp overlap