chr14 : 100,393,734 – 100,394,422
688 bp 66 TFs 5 linked genes
This 688 bp open chromatin element is linked to 5 target genes and is bound by 66 transcription factors.
Linked Genes
5 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
WDR25 17.6 kb Distal Multiome
WARS1 17.7 kb Distal Multiome
SLC25A29 87.6 kb Distal Multiome
YY1 154.9 kb Distal Multiome
ENSG00000258982 155.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:100,388,734 – 100,399,422
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 119 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 140 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 102 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 70 bp overlap
BRD4 8 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 86 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 348 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 147 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 264 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 323 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 572 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 246 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 384 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 196 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 147 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 76 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 121 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 237 bp overlap
CTCF 2 datasets
ChIP liver ENCFF895ERR 251 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 210 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 89 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 56 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 166 bp overlap
ChIP K562 ENCFF136LTS 52 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 307 bp overlap
ESR1 5 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 162 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 192 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 303 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 129 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 108 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 634 bp overlap
ChIP DE DE-FOXA2-2 629 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 594 bp overlap
ChIP DE DE-GATA4-2 688 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 611 bp overlap
ChIP DE DE-GATA6-2 688 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 306 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 434 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 409 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 544 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 500 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 417 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 507 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 133 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 207 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 93 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 365 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 317 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 201 bp overlap
HDGF 3 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 94 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 92 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 334 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 66 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 62 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 236 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 233 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 573 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 100 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 183 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 220 bp overlap
JUND 1 dataset
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 115 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF934ZRG 501 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF659AVU 62 bp overlap
MAX 4 datasets
ChIP K562 ENCFF398VJM 167 bp overlap
ChIP K562 ENCFF524IJO 64 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 103 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 100 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 53 bp overlap
MYC 2 datasets
ChIP K562 ENCFF295NDX 142 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 56 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 218 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 262 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 429 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 314 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 238 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 57 bp overlap
ChIP MCF-7 ENCFF925CGH 55 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 186 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 118 bp overlap
NFIC 3 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 155 bp overlap
ChIP K562 ENCFF167YID 107 bp overlap
ChIP SK-N-SH ENCFF965AKM 71 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 57 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 688 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 281 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 236 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 145 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 58 bp overlap
RELA 1 dataset
ChIP K-562 ENCSR772EEN.RELA.K-562 351 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 219 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 687 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 688 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 383 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 305 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 506 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 643 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 603 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 208 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 343 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 246 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 244 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 371 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 115 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 253 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 128 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 126 bp overlap
TFDP1 2 datasets
ChIP K562 ENCFF584VSB 234 bp overlap
ChIP K562 ENCFF584VSB 485 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 181 bp overlap
VDR 3 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 236 bp overlap
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 327 bp overlap
ChIP THP-1_EtOH_1d GSE89431.VDR.THP-1_EtOH_1d 246 bp overlap
YY1 3 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 160 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 167 bp overlap
ChIP K562 ENCFF660QRE 256 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 302 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 165 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 217 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 188 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 178 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 134 bp overlap
ChIP K562 ENCFF547OSS 199 bp overlap
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