chr1 : 224,880,598 224,880,888
290 bp 71 TFs 1 linked gene
This 290 bp open chromatin element is linked to ENSG00000286719 and is bound by 71 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286719 466 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:224,875,598 – 224,885,888
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 188 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 290 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 83 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 185 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 290 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 204 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 155 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 199 bp overlap
CTCF 2 datasets
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP H9 ENCFF152GTF 290 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 290 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 197 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 290 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 163 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 290 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 233 bp overlap
FOXA2 1 dataset
ChIP Caco-2 GSE66218.FOXA2.Caco-2 75 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 290 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 199 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 244 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 290 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 268 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 153 bp overlap
MAX 2 datasets
ChIP HepG2 ENCFF507HCX 290 bp overlap
ChIP WTC11 ENCFF223QFY 290 bp overlap
MITF 3 datasets
ChIP 501-mel GSE137522.MITF.501-mel 192 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 157 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 145 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 290 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 210 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 105 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 166 bp overlap
NR1I2 2 datasets
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
Motif ES_0h ES_0h-NR1I2_MA1533.2 15 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 290 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 290 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 290 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 290 bp overlap
ChIP HepG2 ENCFF259LUZ 206 bp overlap
ChIP WTC11 ENCFF108TMF 265 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 145 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 218 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 166 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 290 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 236 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 290 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 205 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 290 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 290 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 258 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 198 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 175 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 203 bp overlap
SP1 4 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 183 bp overlap
ChIP H1 ENCFF263FUH 162 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 290 bp overlap
ChIP liver ENCFF597LFJ 80 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 157 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 122 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 290 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 169 bp overlap
TEAD4 4 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 244 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 290 bp overlap
ChIP H1 ENCFF778PAX 183 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 163 bp overlap
TOE1 1 dataset
ChIP MCF-7 ENCFF544WQF 144 bp overlap
TP53 2 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 257 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 276 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 105 bp overlap
ChIP HepG2 ENCFF807KYJ 125 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 138 bp overlap
ChIP WTC11 ENCFF699QGS 197 bp overlap
USF2 3 datasets
ChIP H1 ENCFF434EDF 178 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 134 bp overlap
ChIP WTC11 ENCFF139JAW 225 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 168 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 290 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 228 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 290 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 290 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap