chr13 : 105,937,550 105,937,733
183 bp 71 TFs 0 linked genes
This 183 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:105,932,550 – 105,942,733
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AHR 4 datasets
ChIP MCF-7_DMSO_1d GSE90550.AHR.MCF-7_DMSO_1d 141 bp overlap
ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 135 bp overlap
ChIP MCF-7_TCDD_1d GSE90550.AHR.MCF-7_TCDD_1d 112 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 183 bp overlap
AR 2 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 160 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 173 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 183 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 133 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
BHLHA15 1 dataset
Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap
BHLHE23 1 dataset
Motif DE_12h DE_12h-BHLHE23_MA0817.2 10 bp overlap
BRD4 4 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 164 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 183 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 183 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 172 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 172 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 161 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 154 bp overlap
CHD4 2 datasets
ChIP SCC-9 GSE97839.CHD4.SCC-9 183 bp overlap
ChIP SCC-9_DOC1 GSE97839.CHD4.SCC-9_DOC1 158 bp overlap
CTCF 22 datasets
ChIP BE2C ENCFF757SRF 183 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 127 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 183 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 152 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 134 bp overlap
ChIP MCF-7 ENCFF198DQX 182 bp overlap
ChIP MCF-7 ENCFF414SZG 156 bp overlap
ChIP MCF-7 ENCFF424NQR 166 bp overlap
ChIP MCF-7 ENCFF494VXA 182 bp overlap
ChIP MCF-7 ENCFF844STM 166 bp overlap
ChIP MCF-7 ENCFF954TUV 161 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 149 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 132 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 154 bp overlap
ChIP SK-N-SH ENCFF731NJX 183 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 95 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 95 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 135 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 157 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 159 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 156 bp overlap
CTCFL 4 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 161 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 106 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 137 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 159 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 183 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 174 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 160 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 178 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 183 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 155 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 118 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 132 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 131 bp overlap
ESRRA 3 datasets
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 157 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 141 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 181 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 183 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 183 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 155 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 183 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 175 bp overlap
ChIP SK-N-SH ENCFF764OZD 183 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 155 bp overlap
GATA3 1 dataset
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 183 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 183 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 183 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 183 bp overlap
HEXIM1 1 dataset
ChIP A-375_DMSO GSE68052.HEXIM1.A-375_DMSO 139 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 150 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 183 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 183 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 183 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 125 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 183 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 183 bp overlap
MBD2 1 dataset
ChIP MCF-7 ENCSR940MHE.MBD2.MCF-7 97 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 183 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 152 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 176 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 130 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 175 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 183 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 183 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 183 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 183 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 183 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 183 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 183 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 183 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 128 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
OLIG1 1 dataset
Motif DE_12h DE_12h-OLIG1_MA0826.1 10 bp overlap
OLIG2 1 dataset
Motif DE_12h DE_12h-OLIG2_MA0678.1 10 bp overlap
OLIG3 1 dataset
Motif DE_12h DE_12h-OLIG3_MA0827.1 10 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 183 bp overlap
POU5F1 2 datasets
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 183 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 137 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 183 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 183 bp overlap
RAD21 13 datasets
ChIP GP5D GSE51234.RAD21.GP5D 183 bp overlap
ChIP H1 ENCFF698EWO 146 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 161 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 183 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 114 bp overlap
ChIP MCF-7 ENCFF694KOM 183 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 183 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 136 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 80 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 121 bp overlap
ChIP SK-N-SH ENCFF747MAS 183 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 183 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 152 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 183 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 152 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 176 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 95 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCB1 3 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 183 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 183 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 183 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 183 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 155 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 131 bp overlap
STAT3 7 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 61 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 183 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 157 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 183 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 162 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 148 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 183 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 183 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 183 bp overlap
TCF21 1 dataset
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 136 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 183 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 183 bp overlap
TFAP2C 6 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 183 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 183 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 183 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 183 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 183 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 183 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 99 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 152 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 183 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 183 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 165 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 160 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 183 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap