chr13 : 101,708,015 – 101,708,876

861 bp 78 TFs 0 linked genes

This 861 bp open chromatin element has no linked target genes and is bound by 78 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

78 transcription factors

ATF2 2 datasets

Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 236 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap

BHLHA15 1 dataset

Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

DDX5 1 dataset

ChIP NTERA2 GSE58641.DDX5.NTERA2 217 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 117 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 173 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

EZH2 1 dataset

ChIP LNCaP GSE39459.EZH2.LNCaP 242 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

FOS::JUN 1 dataset

Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap

FOSB::JUN 1 dataset

Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 313 bp overlap

ChIP DE DE-FOXA2-2 277 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 176 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 120 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 393 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 429 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 546 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 510 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 605 bp overlap

HSF1 1 dataset

Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap

HSF2 1 dataset

Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap

HSF4 1 dataset

Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

IRF9 1 dataset

Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap

Irf1 1 dataset

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

JUN 5 datasets

Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 320 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 324 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 636 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 770 bp overlap

JUND 1 dataset

Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 182 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

NANOG 7 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 342 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 204 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 857 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 314 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 244 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 218 bp overlap

ChIP hESC GSE18292.NANOG.hESC 104 bp overlap

NFKB1 1 dataset

Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap

OGT 1 dataset

ChIP PC-3_OSMI-2 GSE112667.OGT.PC-3_OSMI-2 438 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU5F1 7 datasets

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 251 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 507 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 229 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 428 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 191 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 226 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap

RELB 2 datasets

ChIP GM12878 ENCFF217ADF 605 bp overlap

ChIP GM12878 ENCSR387QUV.RELB.GM12878 524 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 802 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 805 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 280 bp overlap

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 463 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 750 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 687 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 207 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 299 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 244 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 182 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 407 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 212 bp overlap

SOX13 1 dataset

Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap

SOX2 2 datasets

Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 340 bp overlap

SOX9 1 dataset

Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Sox3 1 dataset

Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap

Stat2 2 datasets

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap

TARDBP 1 dataset

ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 447 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX21 2 datasets

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 601 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TCF21 1 dataset

Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF343 1 dataset

Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap

ZNF384 2 datasets

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ChIP GM12878 ENCFF229VSP 321 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap