chr12 : 114,665,843 114,666,204
361 bp 83 TFs 0 linked genes
This 361 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:114,660,843 – 114,671,204
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 209 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 238 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 361 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 2 datasets
ChIP WA01 ENCSR850KIP.ASH2L.WA01 81 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 190 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 361 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 339 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 361 bp overlap
BRD4 6 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 328 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 295 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 361 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 253 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 301 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 284 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 361 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 361 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 311 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 328 bp overlap
EGR1 4 datasets
ChIP A-375 GSE116190.EGR1.A-375 259 bp overlap
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 154 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 282 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 178 bp overlap
ERG 3 datasets
ChIP VCaP GSE83650.ERG.VCaP 168 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 168 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 342 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 217 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 177 bp overlap
EZH2 15 datasets
ChIP GM23338 ENCFF613YON 182 bp overlap
ChIP GM23338 ENCFF613YON 187 bp overlap
ChIP GM23338 ENCFF886DXX 311 bp overlap
ChIP H1 ENCFF232NZA 361 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 338 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 319 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 361 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 290 bp overlap
ChIP hESC GSE113817.EZH2.hESC 340 bp overlap
ChIP hepatocyte ENCFF552DZB 361 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 361 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 332 bp overlap
ChIP neural cell ENCFF610EPB 237 bp overlap
ChIP neural progenitor cell ENCFF018MKA 361 bp overlap
ChIP neural progenitor cell ENCFF472NFV 361 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FLI1 3 datasets
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 284 bp overlap
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 193 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 204 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 151 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 316 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 71 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 361 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 361 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 315 bp overlap
JARID2 5 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 83 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 361 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 361 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 361 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 361 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 361 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 361 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 210 bp overlap
MED1 2 datasets
ChIP VCaP GSE148358.MED1.VCaP 361 bp overlap
ChIP VCaP_Darolutamide GSE148358.MED1.VCaP_Darolutamide 361 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 323 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 125 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 249 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 303 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 302 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 338 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 342 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 195 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 174 bp overlap
POLR2A 4 datasets
ChIP SK-N-MC ENCFF088IVG 361 bp overlap
ChIP prostate gland ENCFF832RQK 249 bp overlap
ChIP thyroid gland ENCFF979LRR 342 bp overlap
ChIP vagina ENCFF384GAB 153 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 158 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 361 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 361 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 273 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 298 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 354 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 361 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 121 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 136 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 195 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 123 bp overlap
RBM39 1 dataset
ChIP HepG2 ENCFF084YZE 361 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 361 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 287 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 147 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 361 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 193 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 314 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 70 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 361 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 361 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 264 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 281 bp overlap
SMARCA4 4 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 361 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 361 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 361 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 181 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 259 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 295 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 282 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 263 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 226 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 326 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 84 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 259 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 103 bp overlap
SREBP2 1 dataset
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 185 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 177 bp overlap
SS18 3 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 168 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 257 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 275 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 361 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 361 bp overlap
ChIP H1 ENCFF881NFR 361 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 321 bp overlap
ChIP NT2/D1 ENCFF574SXS 361 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 361 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 235 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 304 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 187 bp overlap
TCF12 2 datasets
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 352 bp overlap
TCF3 1 dataset
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TFAP2A 2 datasets
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 270 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 57 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 361 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFY 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 361 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF711 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZNF711.HEK293T_22Rv1 361 bp overlap
ZNF768 1 dataset
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap