chr12 : 86,293,460 – 86,293,957

497 bp 129 TFs 0 linked genes

This 497 bp open chromatin element has no linked target genes and is bound by 129 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

129 transcription factors

ALX3 1 dataset

Motif DE_48h DE_48h-ALX3_MA0634.2 6 bp overlap

ARNT2 1 dataset

Motif DE_48h DE_48h-ARNT2_MA1464.2 8 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap

Arnt 1 dataset

Motif DE_48h DE_48h-Arnt_MA0004.1 6 bp overlap

CLOCK 1 dataset

Motif DE_48h DE_48h-CLOCK_MA0819.3 7 bp overlap

Creb3l2 1 dataset

Motif DE_48h DE_48h-Creb3l2_MA0608.1 9 bp overlap

Crx 1 dataset

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

DRGX 1 dataset

Motif DE_48h DE_48h-DRGX_MA1481.2 6 bp overlap

DUXA 1 dataset

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

Dlx2 1 dataset

Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap

Dlx5 1 dataset

Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap

Dmbx1 1 dataset

Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

EMX1 1 dataset

Motif DE_48h DE_48h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_48h DE_48h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_48h DE_48h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 289 bp overlap

ERG 1 dataset

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 130 bp overlap

ESX1 1 dataset

Motif DE_48h DE_48h-ESX1_MA0644.3 7 bp overlap

ETV5::DRGX 1 dataset

Motif DE_48h DE_48h-ETV5DRGX_MA1944.2 12 bp overlap

ETV5::HOXA2 1 dataset

Motif DE_48h DE_48h-ETV5HOXA2_MA1948.2 12 bp overlap

EVX1 1 dataset

Motif DE_48h DE_48h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_48h DE_48h-EVX2_MA0888.2 6 bp overlap

FIGLA 1 dataset

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 495 bp overlap

ChIP DE DE-FOXA2-2 460 bp overlap

GATA2 1 dataset

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 6 datasets

ChIP DE DE-GATA4-1 497 bp overlap

ChIP DE DE-GATA4-2 497 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 413 bp overlap

ChIP foregut GSE117136.GATA4.foregut 289 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 385 bp overlap

GATA5 1 dataset

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 497 bp overlap

ChIP DE DE-GATA6-2 497 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 494 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 484 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 497 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 497 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 497 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 404 bp overlap

GBX1 1 dataset

Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap

GLI3 1 dataset

Motif DE_48h DE_48h-GLI3_MA1491.3 15 bp overlap

GSC 1 dataset

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

GSX1 1 dataset

Motif DE_48h DE_48h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_48h DE_48h-GSX2_MA0893.3 7 bp overlap

Gata3 1 dataset

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Gli1 1 dataset

Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap

HES1 1 dataset

Motif DE_48h DE_48h-HES1_MA1099.3 8 bp overlap

HES5 1 dataset

Motif DE_48h DE_48h-HES5_MA0821.2 10 bp overlap

HES6 1 dataset

Motif DE_48h DE_48h-HES6_MA1493.1 10 bp overlap

HEY1 1 dataset

Motif DE_48h DE_48h-HEY1_MA0823.1 10 bp overlap

HEY2 1 dataset

Motif DE_48h DE_48h-HEY2_MA0649.2 9 bp overlap

HOXA1 1 dataset

Motif DE_48h DE_48h-HOXA1_MA1495.2 6 bp overlap

HOXA2 1 dataset

Motif DE_48h DE_48h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_48h DE_48h-HOXA3_MA2119.1 7 bp overlap

HOXA5 1 dataset

Motif DE_48h DE_48h-HOXA5_MA0158.2 8 bp overlap

HOXA6 1 dataset

Motif DE_48h DE_48h-HOXA6_MA1497.2 7 bp overlap

HOXB1 1 dataset

Motif DE_48h DE_48h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_48h DE_48h-HOXB2_MA0902.3 6 bp overlap

HOXB2::ELK1 1 dataset

Motif DE_48h DE_48h-HOXB2ELK1_MA1957.1 14 bp overlap

HOXB3 1 dataset

Motif DE_48h DE_48h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_48h DE_48h-HOXB5_MA0904.3 6 bp overlap

HOXB6 1 dataset

Motif DE_48h DE_48h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_48h DE_48h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_48h DE_48h-HOXB8_MA1502.2 7 bp overlap

HOXC8 1 dataset

Motif DE_48h DE_48h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap

HOXD8 1 dataset

Motif DE_48h DE_48h-HOXD8_MA0910.3 7 bp overlap

ISX 1 dataset

Motif DE_48h DE_48h-ISX_MA0654.2 6 bp overlap

JUN 2 datasets

Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 369 bp overlap

JUND 1 dataset

Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap

KDM1A 1 dataset

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 221 bp overlap

LBX1 1 dataset

Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap

LHX5 1 dataset

Motif DE_48h DE_48h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_48h DE_48h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_48h DE_48h-LMX1B_MA0703.3 8 bp overlap

Lhx1 1 dataset

Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap

Lhx4 1 dataset

Motif DE_48h DE_48h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_48h DE_48h-Lhx8_MA0705.2 6 bp overlap

MAX 1 dataset

Motif DE_48h DE_48h-MAX_MA0058.4 6 bp overlap

MEIS1 1 dataset

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MEOX1 1 dataset

Motif DE_48h DE_48h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_48h DE_48h-MEOX2_MA0706.2 7 bp overlap

MIXL1 1 dataset

Motif DE_48h DE_48h-MIXL1_MA0662.2 6 bp overlap

MLXIPL 1 dataset

Motif DE_48h DE_48h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_48h DE_48h-MNT_MA0825.2 6 bp overlap

MNX1 1 dataset

Motif DE_48h DE_48h-MNX1_MA0707.3 6 bp overlap

MSANTD3 1 dataset

Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap

MYC 1 dataset

Motif DE_48h DE_48h-MYC_MA0147.4 8 bp overlap

MYCN 1 dataset

Motif DE_48h DE_48h-MYCN_MA0104.5 8 bp overlap

MZF1 1 dataset

Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap

Mecom 1 dataset

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

Mlxip 1 dataset

Motif DE_48h DE_48h-Mlxip_MA0622.2 6 bp overlap

NKX6-2 1 dataset

Motif DE_48h DE_48h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_48h DE_48h-NOTO_MA0710.2 7 bp overlap

Npas2 1 dataset

Motif DE_48h DE_48h-Npas2_MA0626.2 8 bp overlap

Nr2F6 1 dataset

Motif DE_48h DE_48h-Nr2F6_MA0728.1 15 bp overlap

OTX1 1 dataset

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap

PAX4 1 dataset

Motif DE_48h DE_48h-PAX4_MA0068.2 8 bp overlap

PDX1 2 datasets

Motif DE_48h DE_48h-PDX1_MA0132.3 6 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 132 bp overlap

PHOX2A 1 dataset

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

PITX1 1 dataset

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

POU6F1 1 dataset

Motif DE_48h DE_48h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap

PROP1 1 dataset

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

PRRX1 1 dataset

Motif DE_48h DE_48h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap

RARA 1 dataset

Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap

RAX2 1 dataset

Motif DE_48h DE_48h-RAX2_MA0717.2 6 bp overlap

RBPJ 1 dataset

ChIP SCC_4h GSE156486.RBPJ.SCC_4h 206 bp overlap

RHOXF1 1 dataset

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

RORA 1 dataset

Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap

SHOX 1 dataset

Motif DE_48h DE_48h-SHOX_MA0630.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 364 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 458 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 419 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 294 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 497 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 497 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap

Shox2 1 dataset

Motif DE_48h DE_48h-Shox2_MA0720.2 6 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 378 bp overlap

TBX2 1 dataset

Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap

TBX3 1 dataset

Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap

TLX2 1 dataset

Motif DE_48h DE_48h-TLX2_MA1577.2 6 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 158 bp overlap

TRPS1 1 dataset

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

UNCX 1 dataset

Motif DE_48h DE_48h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_48h DE_48h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_48h DE_48h-VAX2_MA0723.3 6 bp overlap

VSX1 1 dataset

Motif DE_48h DE_48h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_48h DE_48h-VSX2_MA0726.2 7 bp overlap

ZEB1 1 dataset

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

ZNF143 1 dataset

ChIP MCF-7 GSE76454.ZNF143.MCF-7 50 bp overlap

ZNF701 1 dataset

Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap