chr12 : 8,699,601 – 8,699,996
395 bp 61 TFs 1 linked gene
This 395 bp open chromatin element is linked to RIMKLB and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RIMKLB 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:8,694,601 – 8,704,996
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP RMG-I GSE120058.ARID1A.RMG-I 265 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 223 bp overlap
BCL11A 5 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 91 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 54 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 76 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 84 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 95 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 197 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 393 bp overlap
BRD2 1 dataset
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 196 bp overlap
BRD4 1 dataset
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 217 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 100 bp overlap
CDK8 3 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 57 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 70 bp overlap
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 59 bp overlap
DPF2 4 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 220 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
ChIP K-562 ENCSR219BXP.DPF2.K-562 236 bp overlap
ChIP K562 ENCFF775HUO 393 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 205 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 164 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 152 bp overlap
ChIP DE DE-FOXA2-2 359 bp overlap
FOXP1 1 dataset
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 231 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 222 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 79 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 169 bp overlap
ChIP erythroblast ENCFF867JAR 395 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 389 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 355 bp overlap
ChIP DE DE-GATA4-2 254 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 395 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 312 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 395 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 372 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 393 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 310 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 234 bp overlap
ChIP K562 ENCFF928TKZ 395 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 193 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 395 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 247 bp overlap
ChIP K562 ENCFF055GAZ 342 bp overlap
ChIP K562 ENCFF317JJX 342 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 395 bp overlap
KMT2A 5 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 330 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 279 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 311 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 283 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 160 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 199 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 166 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 395 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 212 bp overlap
ChIP K562 ENCFF333ZIV 270 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 282 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 235 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 285 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 217 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 202 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 244 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 211 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 249 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 334 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 87 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 291 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 90 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 153 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 198 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 337 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 395 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 338 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 388 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 312 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 370 bp overlap
SMARCA4 7 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 88 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 128 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 230 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 225 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 395 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 330 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 145 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 157 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 206 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
SPI1 8 datasets
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 190 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 186 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 173 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 158 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 162 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 200 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 227 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 106 bp overlap
TRIM25 1 dataset
ChIP K562 ENCFF786UTW 347 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 131 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 389 bp overlap
ChIP K562 ENCFF053XDV 267 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 395 bp overlap
ChIP K562 ENCFF648EZG 318 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 395 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 395 bp overlap
ChIP K562 ENCFF521DSV 395 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 221 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 243 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 380 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 302 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 395 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 362 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 138 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 312 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 192 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 395 bp overlap
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