chr11 : 107,218,334 – 107,218,805

471 bp 71 TFs 0 linked genes

This 471 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

71 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

ATF2 1 dataset

ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 67 bp overlap

ATF3 1 dataset

ChIP K-562 ENCSR028UIU.ATF3.K-562 162 bp overlap

Atoh1 1 dataset

Motif DE_36h DE_36h-Atoh1_MA1467.3 7 bp overlap

BRD4 3 datasets

ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 327 bp overlap

ChIP CHL-1_OTX015 GSE95585.BRD4.CHL-1_OTX015 244 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 229 bp overlap

BRF1 1 dataset

ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap

CREB1 6 datasets

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 183 bp overlap

ChIP HepG2 ENCFF792THT 126 bp overlap

ChIP MCF-7 ENCFF341ZEM 99 bp overlap

ChIP MCF-7 ENCFF867SAS 115 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 166 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 154 bp overlap

CREB3L1 1 dataset

Motif DE_36h DE_36h-CREB3L1_MA0839.2 13 bp overlap

CREB3L4 1 dataset

Motif DE_36h DE_36h-CREB3L4_MA1474.2 10 bp overlap

CREBBP 1 dataset

ChIP LS180_125 GSE39277.CREBBP.LS180_125 126 bp overlap

E2F7 1 dataset

Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap

E4F1 1 dataset

ChIP K-562 ENCSR731LHZ.E4F1.K-562 151 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 258 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 154 bp overlap

FLI1 2 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 186 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 168 bp overlap

FOXA1 1 dataset

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 183 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 365 bp overlap

ChIP DE DE-FOXA2-2 390 bp overlap

Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_36h DE_36h-FOXA3_MA1683.2 7 bp overlap

FOXF2 1 dataset

Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap

FOXI1 1 dataset

Motif DE_36h DE_36h-FOXI1_MA0042.2 7 bp overlap

FOXN3 1 dataset

Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap

FOXP1 1 dataset

Motif DE_36h DE_36h-FOXP1_MA0481.4 7 bp overlap

FOXP4 1 dataset

Motif DE_36h DE_36h-FOXP4_MA2117.1 7 bp overlap

Foxj3 1 dataset

Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap

GATA4 2 datasets

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 223 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 97 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 357 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 471 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 310 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 471 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 471 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 362 bp overlap

GLIS2 2 datasets

ChIP HEK293 ENCFF446EIF 334 bp overlap

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 153 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

MED1 1 dataset

ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 109 bp overlap

NEUROD1 1 dataset

Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_36h DE_36h-NEUROG2_MA1642.2 7 bp overlap

NFIC 2 datasets

ChIP K-562 ENCSR796ITY.NFIC.K-562 128 bp overlap

ChIP K562 ENCFF167YID 114 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap

PHF19 1 dataset

ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 249 bp overlap

POU2F1 1 dataset

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 77 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 343 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCFF283AJL 71 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 59 bp overlap

PRDM9 1 dataset

Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap

Prdm5 2 datasets

Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap

RBPJ 1 dataset

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

SCRT1 2 datasets

ChIP HEK293 ENCFF513YVP 283 bp overlap

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 229 bp overlap

SCRT2 1 dataset

ChIP HEK293 ENCFF711QQB 279 bp overlap

SMAD2 1 dataset

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 304 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 280 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 367 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 130 bp overlap

SP1 1 dataset

Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap

SP4 1 dataset

Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap

TBX19 1 dataset

Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap

TBXT 1 dataset

Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap

THAP1 1 dataset

Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap

TRIM28 5 datasets

ChIP HEK293 ENCFF582MWI 471 bp overlap

ChIP HEK293 ENCFF582MWI 244 bp overlap

ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 456 bp overlap

ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 259 bp overlap

ChIP U2OS ENCSR000EYC.TRIM28.U2OS 269 bp overlap

TWIST1 1 dataset

Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 207 bp overlap

ZBTB26 1 dataset

Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 100 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 205 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap

ZNF263 2 datasets

Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap

ChIP HEK293 ENCFF336CWQ 290 bp overlap

ZNF341 1 dataset

ChIP HEK293 GSE76494.ZNF341.HEK293 131 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 72 bp overlap

ZNF398 1 dataset

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 184 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 225 bp overlap

ZNF513 2 datasets

ChIP HEK293 ENCFF457TCC 181 bp overlap

ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 192 bp overlap

ZNF629 1 dataset

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 157 bp overlap

ZNF684 1 dataset

Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap

Zfp809 1 dataset

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap

Zfp961 1 dataset

Motif DE_36h DE_36h-Zfp961_MA2126.1 8 bp overlap