chr11:33,049,426–33,050,404

chr11 : 33,049,426 – 33,050,404

978 bp 103 TFs 6 linked genes

This 978 bp open chromatin element is linked to 6 target genes and is bound by 103 transcription factors.

Linked Genes

6 genes

Gene	Expression	Dist. to TSS	Distance	Link type
TCP11L1		9.9 kb	Proximal	Proximity
LINC00294		26.2 kb	Distal	Multiome
CSTF3		111.5 kb	Distal	Multiome
CSTF3-DT		111.7 kb	Distal	Multiome
QSER1		157.1 kb	Distal	Multiome
HIPK3		207.5 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

103 transcription factors

ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 252 bp overlap

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 316 bp overlap

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 115 bp overlap

ATOH8 1 dataset

ChIP A549 ENCFF772HNB 281 bp overlap

Arid3a 3 datasets

Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap

Atf3 3 datasets

Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

Motif DE_72h DE_72h-Atf3_MA1988.2 7 bp overlap

BACH1 3 datasets

Motif DE_48h DE_48h-BACH1_MA1633.2 9 bp overlap

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

Motif DE_72h DE_72h-BACH1_MA1633.2 9 bp overlap

BARX2 3 datasets

Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap

BATF 3 datasets

Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

Motif DE_72h DE_72h-BATF_MA1634.2 7 bp overlap

BATF3 3 datasets

Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

Motif DE_72h DE_72h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 3 datasets

Motif DE_48h DE_48h-BATFJUN_MA0462.3 7 bp overlap

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

Motif DE_72h DE_72h-BATFJUN_MA0462.3 7 bp overlap

BNC2 3 datasets

Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

Motif DE_72h DE_72h-BNC2_MA1928.2 7 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 118 bp overlap

CTCF 6 datasets

Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap

Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap

Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap

Motif DE_72h DE_72h-CTCF_MA1930.2 33 bp overlap

ChIP H9 ENCFF152GTF 461 bp overlap

ChIP endodermal cell ENCFF471YCZ 461 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 382 bp overlap

DMRTA2 1 dataset

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

DUX4 4 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap

Ddit3::Cebpa 4 datasets

Motif DE_36h DE_36h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif DE_48h DE_48h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif DE_60h DE_60h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif DE_72h DE_72h-Ddit3Cebpa_MA0019.2 10 bp overlap

ChIP A-549 ENCSR171TDM.EHF.A-549 226 bp overlap

ChIP A549 ENCFF352AOI 181 bp overlap

Motif DE_72h DE_72h-ELF1_MA0473.4 9 bp overlap

Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_72h DE_72h-ETV2FOXI1_MA1942.2 11 bp overlap

Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap

ChIP A549 ENCFF029EEU 341 bp overlap

FOXA1 9 datasets

ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 346 bp overlap

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 163 bp overlap

ChIP A-549 ENCSR000BPX.FOXA1.A-549 224 bp overlap

ChIP A-549 ENCSR000BRD.FOXA1.A-549 135 bp overlap

ChIP HepG2 ENCFF207NVJ 281 bp overlap

ChIP HepG2 ENCFF740VZW 285 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 242 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 252 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 212 bp overlap

FOXA2 7 datasets

ChIP Caco-2 GSE66218.FOXA2.Caco-2 135 bp overlap

ChIP DE DE-FOXA2-1 978 bp overlap

ChIP DE DE-FOXA2-2 975 bp overlap

ChIP HepG2 ENCFF533COJ 297 bp overlap

ChIP HepG2 ENCFF894AYY 381 bp overlap

ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 364 bp overlap

ChIP liver ENCFF888VJF 345 bp overlap

FOXE1 3 datasets

Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap

Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap

Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap

FOXF2 1 dataset

ChIP A549 ENCFF148XDC 289 bp overlap

FOXH1 4 datasets

Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap

Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap

FOXO6 3 datasets

Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap

Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap

Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap

FOXS1 2 datasets

ChIP A-549 ENCSR326AQV.FOXS1.A-549 171 bp overlap

ChIP A549 ENCFF870VDS 277 bp overlap

GABPA 1 dataset

Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 978 bp overlap

ChIP DE DE-GATA4-2 978 bp overlap

ChIP foregut GSE117136.GATA4.foregut 128 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 885 bp overlap

ChIP DE DE-GATA6-2 978 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 776 bp overlap

HDAC2 1 dataset

ChIP HepG2 ENCFF087XCR 337 bp overlap

ChIP A549 ENCFF588UHP 325 bp overlap

HMGA2 1 dataset

ChIP A549 ENCFF624CAQ 321 bp overlap

HNF1A 1 dataset

Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap

HNF1B 2 datasets

Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap

ChIP foregut GSE117136.HNF1B.foregut 253 bp overlap

HNF4A 1 dataset

ChIP liver ENCFF449HPV 441 bp overlap

HOXA7 1 dataset

ChIP A549 ENCFF746ZBJ 289 bp overlap

HOXB13 2 datasets

ChIP A-549 ENCSR967ZMR.HOXB13.A-549 245 bp overlap

ChIP A549 ENCFF870NOA 315 bp overlap

HOXB5 2 datasets

ChIP A-549 ENCSR748HJZ.HOXB5.A-549 217 bp overlap

ChIP A549 ENCFF891VDO 168 bp overlap

HOXC13 4 datasets

Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap

Motif DE_48h DE_48h-HOXC13_MA0907.2 9 bp overlap

Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap

Motif DE_72h DE_72h-HOXC13_MA0907.2 9 bp overlap

HOXD12::ELK1 1 dataset

Motif DE_60h DE_60h-HOXD12ELK1_MA1958.2 13 bp overlap

Ikzf3 1 dataset

Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap

Isl1 3 datasets

Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap

Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap

Motif DE_72h DE_72h-Isl1_MA1608.2 7 bp overlap

Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

Motif DE_72h DE_72h-Jun_MA0489.3 8 bp overlap

NPAS2 1 dataset

ChIP A549 ENCFF550ZFT 292 bp overlap

NR2E3 1 dataset

ChIP A549 ENCFF833WDR 322 bp overlap

NR2F1 1 dataset

Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap

NR3C1 2 datasets

ChIP A-549 ENCSR000BHF.NR3C1.A-549 142 bp overlap

ChIP A-549 ENCSR000BJR.NR3C1.A-549 120 bp overlap

NR4A1 4 datasets

Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap

Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

Motif DE_72h DE_72h-NR4A1_MA1112.3 8 bp overlap

NR5A2 2 datasets

ChIP A-549 ENCSR190GIW.NR5A2.A-549 233 bp overlap

ChIP A549 ENCFF834RVE 174 bp overlap

Nr1h3::Rxra 4 datasets

Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif DE_72h DE_72h-Nr1h3Rxra_MA0494.2 16 bp overlap

Nr2e1 4 datasets

Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap

Nr2f6 1 dataset

Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap

Nr5A2 3 datasets

Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap

Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap

Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap

ONECUT2 1 dataset

ChIP A-549 GSE102599.ONECUT2.A-549 65 bp overlap

PAX3 3 datasets

Motif DE_48h DE_48h-PAX3_MA0780.1 10 bp overlap

Motif DE_60h DE_60h-PAX3_MA0780.1 10 bp overlap

Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap

PBX1 2 datasets

ChIP A-549 ENCSR637RKG.PBX1.A-549 207 bp overlap

ChIP A549 ENCFF475JCE 341 bp overlap

PHOX2A 3 datasets

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap

POLR2A 1 dataset

ChIP transverse colon ENCFF610RWV 425 bp overlap

PPARD 1 dataset

Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap

PRDM1 1 dataset

ChIP A549 ENCFF012KDW 281 bp overlap

PROP1 3 datasets

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap

Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap

PROX1 2 datasets

ChIP HepG2 ENCFF016ZJS 481 bp overlap

ChIP HepG2 ENCFF016ZJS 471 bp overlap

Pax7 3 datasets

Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap

Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap

Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RUNX3 4 datasets

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap

Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap

Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap

RXRA::VDR 3 datasets

Motif DE_48h DE_48h-RXRAVDR_MA0074.1 15 bp overlap

Motif DE_60h DE_60h-RXRAVDR_MA0074.1 15 bp overlap

Motif DE_72h DE_72h-RXRAVDR_MA0074.1 15 bp overlap

Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap

Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap

Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 452 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 397 bp overlap

SOX10 1 dataset

Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap

SOX12 1 dataset

Motif DE_60h DE_60h-SOX12_MA1561.2 10 bp overlap

SOX13 1 dataset

ChIP HepG2 ENCFF062VSQ 357 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 491 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 607 bp overlap

Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap

SPI1 2 datasets

ChIP HL-60 ENCFF645GBT 271 bp overlap

ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 148 bp overlap

STAT1::STAT2 1 dataset

Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap

STAT3 1 dataset

ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 176 bp overlap

Sox11 1 dataset

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap

Stat5b 2 datasets

Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap

Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap

Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap

ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 130 bp overlap

ZBTB17 3 datasets

Motif DE_48h DE_48h-ZBTB17_MA2102.1 8 bp overlap

Motif DE_60h DE_60h-ZBTB17_MA2102.1 8 bp overlap

Motif DE_72h DE_72h-ZBTB17_MA2102.1 8 bp overlap

ZNF143 3 datasets

Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap

Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap

Motif DE_72h DE_72h-ZNF143_MA0088.2 16 bp overlap

ZNF302 1 dataset

ChIP A549 ENCFF333REI 305 bp overlap

ZNF317 3 datasets

Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap

ZNF331 2 datasets

Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap

Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap

ZNF528 4 datasets

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap

ZNF624 2 datasets

ChIP A-549 ENCSR419VVI.ZNF624.A-549 217 bp overlap

ChIP A549 ENCFF802OXN 297 bp overlap

ZNF652 1 dataset

Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap

ZNF680 1 dataset

Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap

ZNF766 7 datasets

Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap

Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap

Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap

Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap

Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap

Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap

Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap

ZSCAN20 1 dataset

ChIP A549 ENCFF611TGC 285 bp overlap

ZSCAN21 1 dataset

Motif DE_72h DE_72h-ZSCAN21_MA2336.1 7 bp overlap

ZSCAN4 1 dataset

Motif DE_72h DE_72h-ZSCAN4_MA1155.1 15 bp overlap

Zic1::Zic2 4 datasets

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_48h DE_48h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 4 datasets

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap

Motif DE_48h DE_48h-Zic3_MA0697.3 7 bp overlap

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap

Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap