chr11 : 31,802,527 – 31,803,248
721 bp 61 TFs 3 linked genes
This 721 bp open chromatin element is linked to PAX6, PAUPAR, and ENSG00000285283 and is bound by 61 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PAX6 2.2 kb Proximal Proximity
PAUPAR 9.1 kb Proximal Proximity
ENSG00000285283 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:31,797,527 – 31,808,248
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 183 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 183 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 336 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 466 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 281 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 165 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 462 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 131 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 155 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 346 bp overlap
ChIP H1 ENCFF095JHA 127 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 624 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 304 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 107 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 277 bp overlap
EZH2 36 datasets
ChIP A673 ENCFF790MVL 63 bp overlap
ChIP A673 ENCFF790MVL 285 bp overlap
ChIP A673 ENCFF955JRZ 63 bp overlap
ChIP A673 ENCFF955JRZ 285 bp overlap
ChIP A673 ENCFF955JRZ 552 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 285 bp overlap
ChIP GM23338 ENCFF613YON 653 bp overlap
ChIP GM23338 ENCFF886DXX 576 bp overlap
ChIP H1 ENCFF232NZA 721 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 593 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 626 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 653 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 299 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 204 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 264 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 309 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 345 bp overlap
ChIP SK-N-SH ENCFF657FZK 376 bp overlap
ChIP astrocyte ENCFF365JTP 578 bp overlap
ChIP astrocyte ENCFF365JTP 292 bp overlap
ChIP astrocyte ENCFF365JTP 66 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 517 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 361 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 585 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 661 bp overlap
ChIP fibroblast of lung ENCFF479BAW 304 bp overlap
ChIP fibroblast of lung ENCFF479BAW 158 bp overlap
ChIP fibroblast of lung ENCFF479BAW 98 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 685 bp overlap
ChIP keratinocyte ENCFF070STK 493 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 125 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 443 bp overlap
ChIP neural progenitor cell ENCFF472NFV 89 bp overlap
ChIP neural progenitor cell ENCFF472NFV 361 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 207 bp overlap
EZH2_phosphoT487 2 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 404 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 288 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 291 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 375 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 259 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 465 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 400 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 268 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 268 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 84 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 58 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
JARID2 1 dataset
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 385 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 553 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 539 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 170 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 248 bp overlap
ChIP HepG2 ENCFF701PYP 275 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 60 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 228 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 324 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 289 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 318 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 315 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 305 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 288 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 348 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 577 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 510 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 507 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 179 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 630 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 189 bp overlap
RING1 2 datasets
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 389 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 84 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 676 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 255 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 224 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 225 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 317 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 464 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 549 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 347 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 259 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 411 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 121 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 188 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 266 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 236 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 226 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 172 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 224 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 200 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 220 bp overlap
SUZ12 13 datasets
ChIP GM12878 ENCFF498QAM 85 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 572 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 721 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 479 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 386 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 288 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 515 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 557 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 674 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 383 bp overlap
ChIP NT2/D1 ENCFF574SXS 86 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 515 bp overlap
TCF12 3 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 156 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 398 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 190 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 414 bp overlap
ZBTB1 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 179 bp overlap
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 201 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF512 2 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 275 bp overlap
ChIP WTC11 ENCFF086TTM 397 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 123 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 333 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Huangfu Lab · Publications · Resources · Contact