chr11 : 31,799,658 – 31,800,256
598 bp 54 TFs 1 linked gene
This 598 bp open chromatin element is linked to PAX6 and is bound by 54 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PAX6 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:31,794,658 – 31,805,256
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 205 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 166 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 488 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 80 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 195 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 161 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 210 bp overlap
ChIP hESC GSE133412.CBX7.hESC 107 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 122 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 120 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 91 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 182 bp overlap
CTCF 1 dataset
ChIP keratinocyte GSE154221.CTCF.keratinocyte 134 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 115 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 192 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 186 bp overlap
ChIP K-562 GSE23730.ERG.K-562 158 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 144 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 154 bp overlap
ESR1 4 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 210 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 214 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 148 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 215 bp overlap
EZH2 34 datasets
ChIP A673 ENCFF790MVL 108 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 228 bp overlap
ChIP GM23248 ENCFF404ZHM 155 bp overlap
ChIP GM23338 ENCFF613YON 329 bp overlap
ChIP GM23338 ENCFF613YON 329 bp overlap
ChIP GM23338 ENCFF613YON 317 bp overlap
ChIP GM23338 ENCFF886DXX 65 bp overlap
ChIP GM23338 ENCFF886DXX 208 bp overlap
ChIP GM23338 ENCFF886DXX 56 bp overlap
ChIP H1 ENCFF232NZA 598 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 286 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 224 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 168 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 220 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 326 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 304 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 196 bp overlap
ChIP SK-N-SH ENCFF657FZK 134 bp overlap
ChIP SK-N-SH ENCFF657FZK 333 bp overlap
ChIP astrocyte ENCFF365JTP 312 bp overlap
ChIP astrocyte ENCFF365JTP 274 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 227 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 219 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 242 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 357 bp overlap
ChIP hepatocyte ENCFF118DKH 53 bp overlap
ChIP hepatocyte ENCFF552DZB 428 bp overlap
ChIP neural progenitor cell ENCFF018MKA 491 bp overlap
ChIP neural progenitor cell ENCFF018MKA 429 bp overlap
ChIP neural progenitor cell ENCFF472NFV 499 bp overlap
ChIP neural progenitor cell ENCFF472NFV 64 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 231 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 173 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 191 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 247 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 201 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 164 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 74 bp overlap
ChIP DE DE-GATA4-2 127 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-2 176 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 126 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 131 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 191 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 284 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 217 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 232 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 176 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 257 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 127 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 334 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 123 bp overlap
JARID2 4 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 265 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 233 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 261 bp overlap
ChIP hESC GSE133412.JARID2.hESC 55 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 188 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 167 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 165 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 134 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 231 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 199 bp overlap
PCGF2 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 209 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 300 bp overlap
PDX1 2 datasets
ChIP islet ERP001456.PDX1.islet 139 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 166 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 204 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 598 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 235 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 598 bp overlap
RING1 2 datasets
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 153 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 598 bp overlap
RNF2 7 datasets
ChIP H1 ENCFF239FFS 283 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.RNF2.HEK293T_PCGF1356fl 52 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 60 bp overlap
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 146 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 50 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 194 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 598 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 212 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 267 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 172 bp overlap
SMAD2-3 5 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 182 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 232 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 201 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 102 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 79 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 192 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 471 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 205 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 222 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 258 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 348 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 417 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 284 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 239 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 259 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 458 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 121 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 168 bp overlap
SUZ12 19 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 64 bp overlap
ChIP H1 ENCFF507HGF 137 bp overlap
ChIP H1 ENCFF881NFR 598 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 208 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 200 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 78 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 172 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 145 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 598 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 230 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 142 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 598 bp overlap
ChIP NT2/D1 ENCFF574SXS 337 bp overlap
ChIP NT2/D1 ENCFF574SXS 65 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 373 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 257 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 260 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 208 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 203 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 170 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 170 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 185 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 140 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 273 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 235 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 159 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 279 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 197 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 221 bp overlap
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