chr10 : 106,147,071 106,147,500
429 bp 83 TFs 0 linked genes
This 429 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:106,142,071 – 106,152,500
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 429 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 355 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 415 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 260 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 313 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 313 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 262 bp overlap
DMRTA2 1 dataset
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 176 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 310 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 429 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 193 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 417 bp overlap
FERD3L 1 dataset
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 324 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 429 bp overlap
ChIP DE DE-FOXA2-2 429 bp overlap
Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 246 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 218 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 306 bp overlap
FOXA3 1 dataset
Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXI1 1 dataset
Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 338 bp overlap
FOXP1 1 dataset
Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GATA2 7 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP SH-SY5Y ENCFF485YIB 274 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 429 bp overlap
ChIP SK-N-SH ENCFF764OZD 415 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 420 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 405 bp overlap
GATA3 9 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 350 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 322 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 331 bp overlap
ChIP NGP GSE65664.GATA3.NGP 198 bp overlap
ChIP SH-SY5Y ENCFF475HYF 208 bp overlap
ChIP SH-SY5Y ENCFF475HYF 231 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 341 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 429 bp overlap
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 429 bp overlap
ChIP DE DE-GATA4-2 429 bp overlap
ChIP G296S GSE85628.GATA4.G296S 313 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 313 bp overlap
ChIP foregut GSE117136.GATA4.foregut 394 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 376 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 368 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 429 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 408 bp overlap
ChIP H9 ERP004206.GATA6.H9 227 bp overlap
ChIP foregut GSE117136.GATA6.foregut 395 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 396 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 429 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 354 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 396 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 197 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 429 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 429 bp overlap
HSF1 1 dataset
Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_60h DE_60h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_60h DE_60h-HSF4_MA0771.1 13 bp overlap
Hand1 1 dataset
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 429 bp overlap
Irf1 1 dataset
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 302 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF971JKN 291 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 183 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 424 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 296 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 429 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 429 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 383 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 254 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 191 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 390 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 243 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 365 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 429 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
RAD21 2 datasets
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 429 bp overlap
RARA 1 dataset
ChIP SK-N-SH GSE69119.RARA.SK-N-SH 277 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 169 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 426 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 101 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 138 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 143 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 429 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 354 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 161 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 233 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 160 bp overlap
SMARCA4 7 datasets
ChIP NGP GSE134626.SMARCA4.NGP 130 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 429 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 227 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 311 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 294 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 222 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 383 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 316 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 429 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 328 bp overlap
ChIP SK-N-SH ENCFF270OWF 353 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 386 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 147 bp overlap
TFAP4 1 dataset
ChIP LNCaP GSE28857.TFAP4.LNCaP 163 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 211 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 297 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 364 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 429 bp overlap
TWIST1 1 dataset
Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 190 bp overlap
YY1 2 datasets
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 231 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 152 bp overlap
ZBTB18 1 dataset
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
ZNF331 1 dataset
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF549 1 dataset
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 331 bp overlap
ZSCAN16 1 dataset
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap