chr1 : 177,561,250 177,561,753
503 bp 71 TFs 0 linked genes
This 503 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:177,556,250 – 177,566,753
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ARID3A 3 datasets
ChIP GM12878 ENCFF006WWZ 326 bp overlap
ChIP GM12878 ENCSR778UBR.ARID3A.GM12878 275 bp overlap
ChIP GM12878 ENCSR725LYT.ARID3A.GM12878 154 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 356 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 255 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 165 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 251 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 437 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCFF576UEQ 202 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 256 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 279 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 291 bp overlap
BHLHE40 5 datasets
ChIP GM12878 ENCFF010ZUU 87 bp overlap
ChIP GM12878 ENCFF521IZR 279 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 294 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 278 bp overlap
ChIP GM12878 ENCSR000DZJ.BHLHE40.GM12878 217 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 429 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 427 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 258 bp overlap
CUX1 3 datasets
ChIP GM12878 ENCFF064TOM 308 bp overlap
ChIP GM12878 ENCFF064TOM 108 bp overlap
ChIP GM12878 ENCSR000DYR.CUX1.GM12878 206 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 363 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 503 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 156 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 196 bp overlap
ChIP GM12878 ENCFF813OXE 243 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 293 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 359 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 382 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 281 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 285 bp overlap
ChIP GM12878 ENCFF242HCG 283 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 260 bp overlap
ChIP GM12878 ENCSR000DZD.EP300.GM12878 215 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 281 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 294 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE35109.ESR1.MCF-7 110 bp overlap
ETV6 4 datasets
ChIP GM12878 ENCFF105ZMI 420 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 378 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 291 bp overlap
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 350 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 443 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 503 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 491 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 476 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 355 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 503 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 405 bp overlap
ChIP DE DE-FOXA2-2 422 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 440 bp overlap
ChIP DE DE-GATA4-2 426 bp overlap
ChIP foregut GSE117136.GATA4.foregut 310 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 303 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 349 bp overlap
ChIP DE DE-GATA6-2 426 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 348 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 322 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 406 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 337 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 360 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 296 bp overlap
ChIP foregut GSE117136.GATA6.foregut 411 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 413 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 458 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 503 bp overlap
ChIP GM12878 ENCFF824TGK 503 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 466 bp overlap
ChIP GM12878 ENCFF918AID 447 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 503 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 498 bp overlap
IRF4 6 datasets
ChIP GM12878 ENCFF769ZDL 240 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 199 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 151 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 482 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 126 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 381 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 212 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 135 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 430 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 323 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 445 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 482 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 503 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 501 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 148 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 254 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 417 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 359 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 503 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 232 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 323 bp overlap
NR2C1 2 datasets
ChIP GM12878 ENCFF101ELO 346 bp overlap
ChIP GM12878 ENCSR784VIQ.NR2C1.GM12878 239 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 421 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 503 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCFF503GOV 297 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 278 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 116 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 287 bp overlap
RB1 2 datasets
ChIP GM12878 ENCFF495RZI 375 bp overlap
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 254 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 354 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 503 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 132 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 207 bp overlap
SMAD1 2 datasets
ChIP GM12878 ENCFF130NRZ 335 bp overlap
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 321 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 205 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 212 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 192 bp overlap
SPI1 7 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 205 bp overlap
ChIP GM12878 ENCFF134LCP 200 bp overlap
ChIP GM12891 ENCFF563IUT 175 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 221 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 171 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 260 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 181 bp overlap
SPIB 2 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 206 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 215 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 237 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 273 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 498 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 333 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 408 bp overlap
TCF12 4 datasets
ChIP GM12878 ENCFF433DMU 194 bp overlap
ChIP GM12878 ENCFF506WWB 181 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 259 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 141 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 204 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 142 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 370 bp overlap
YBX1 2 datasets
ChIP GM12878 ENCFF641EEK 325 bp overlap
ChIP GM12878 ENCSR205SKQ.YBX1.GM12878 282 bp overlap
ZFP36 1 dataset
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 263 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 302 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 435 bp overlap
ZNF24 2 datasets
ChIP GM12878 ENCFF688STO 303 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 225 bp overlap