chr8 : 141,016,712 141,017,668
956 bp 80 TFs 3 linked genes
This 956 bp open chromatin element is linked to PTK2, DENND3, and SLC45A4 and is bound by 80 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
PTK2 15.8 kb Distal Multiome
DENND3 111.5 kb Distal Multiome
SLC45A4 291.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:141,011,712 – 141,022,668
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 188 bp overlap
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 224 bp overlap
ARID1A 5 datasets
ChIP 12Z GSE129781.ARID1A.12Z 103 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 933 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 226 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 289 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 97 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 219 bp overlap
ARNTL 2 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 68 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 68 bp overlap
ATOH8 1 dataset
ChIP A549 ENCFF772HNB 281 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 158 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 90 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 119 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 119 bp overlap
BRD4 14 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 113 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 204 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 472 bp overlap
ChIP MDA-MB-231_JQ1-pos_L GSE136151.BRD4.MDA-MB-231_JQ1-pos_L 132 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 91 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 118 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 248 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 247 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 367 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 169 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 438 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 95 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 348 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 100 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 99 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 369 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 531 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 251 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 135 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 485 bp overlap
ChIP BLaER1 ENCFF274GAT 402 bp overlap
ChIP BLaER1 ENCFF335XTP 91 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 192 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 265 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 256 bp overlap
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
EP300 1 dataset
ChIP A549 ENCFF960ZEI 94 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 266 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 132 bp overlap
ChIP MM.1S ENCFF138BXR 457 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 192 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 137 bp overlap
ChIP MCF-7 ENCFF282FWZ 171 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 77 bp overlap
FOSL1 2 datasets
ChIP 143B GSE74230.FOSL1.143B 52 bp overlap
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 133 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 106 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 104 bp overlap
ChIP A549 ENCFF651PDH 88 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 61 bp overlap
ChIP MDA-MB-231 GSE132098.FOSL2.MDA-MB-231 74 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 311 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 252 bp overlap
GATA6 5 datasets
ChIP DE_D2 S55-DE-d2-GATA6-exp2 290 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 115 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 577 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 296 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 249 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 166 bp overlap
HOXB5 1 dataset
ChIP A549 ENCFF891VDO 113 bp overlap
JUN 11 datasets
ChIP 786-O GSE86092.JUN.786-O 268 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 956 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 300 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 956 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 916 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 506 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 140 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 956 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 590 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 360 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 508 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 101 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCFF642OHL 54 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 97 bp overlap
MAX 2 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 62 bp overlap
ChIP MDA-MB-231 GSE127192.MAX.MDA-MB-231 160 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 582 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 550 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 273 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 342 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 286 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 66 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 162 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 856 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 382 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 167 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 380 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 380 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 193 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 149 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 191 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 184 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 117 bp overlap
SIN3A 1 dataset
ChIP A549 ENCFF752ATT 220 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 931 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 857 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 597 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 285 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 509 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 509 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 283 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 84 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 115 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 114 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 123 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 870 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 333 bp overlap
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 394 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 315 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 271 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 140 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 162 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 263 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 223 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 369 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 140 bp overlap
TEAD1 4 datasets
ChIP H69 GSE62274.TEAD1.H69 211 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 73 bp overlap
ChIP HepG2 ENCFF661PNM 71 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 125 bp overlap
TEAD4 7 datasets
ChIP HCT-116_F4 GSE152144.TEAD4.HCT-116_F4 136 bp overlap
ChIP HepG2 ENCFF006QNB 117 bp overlap
ChIP Ishikawa ENCFF772OTG 51 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 169 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 67 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 74 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 66 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 198 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 141 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 164 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 226 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 98 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 67 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 52 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 492 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 185 bp overlap
ZFHX2 2 datasets
ChIP HEK293 ENCFF167TUA 214 bp overlap
ChIP HEK293 ENCFF167TUA 303 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 199 bp overlap
ChIP K562 ENCFF255RZG 297 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 319 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 206 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 229 bp overlap
ZNF436 1 dataset
ChIP HEK293 GSE76494.ZNF436.HEK293 163 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 283 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 84 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 428 bp overlap