chr7 : 78,769,490 – 78,769,856
366 bp 57 TFs 1 linked gene
This 366 bp open chromatin element is linked to MAGI2 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MAGI2 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:78,764,490 – 78,774,856
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 62 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 122 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 174 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 238 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 366 bp overlap
BATF 1 dataset
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 73 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 213 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF010ZUU 97 bp overlap
ChIP GM12878 ENCFF521IZR 129 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 50 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 324 bp overlap
BRD4 7 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 145 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 366 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 69 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 192 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 366 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 153 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 261 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 267 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 127 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 57 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 57 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 238 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 85 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF039QRE 102 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 231 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 210 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 146 bp overlap
EZH2 7 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 366 bp overlap
ChIP A673 ENCFF955JRZ 350 bp overlap
ChIP A673 ENCFF955JRZ 327 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 319 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 242 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 242 bp overlap
ChIP keratinocyte ENCFF070STK 174 bp overlap
FOXA1 1 dataset
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 127 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 258 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 210 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 102 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 240 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF238LYK 179 bp overlap
IRF4 6 datasets
ChIP B-cell GSE142493.IRF4.B-cell 110 bp overlap
ChIP GM12878 ENCFF769ZDL 85 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 53 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 116 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 53 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 197 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 141 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 72 bp overlap
KDM1A 4 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 133 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 120 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 186 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 241 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 366 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 174 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 308 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 76 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 320 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 203 bp overlap
ChIP neural cell ENCFF623HQN 137 bp overlap
ChIP neural cell ENCFF623HQN 186 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 366 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 366 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 86 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 52 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 366 bp overlap
POLR2A 2 datasets
ChIP GM12891 ENCFF012SUT 280 bp overlap
ChIP neural cell ENCFF604SPB 366 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 366 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 366 bp overlap
RBPJ 1 dataset
ChIP LCL GSE75503.RBPJ.LCL 50 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 170 bp overlap
RELA 1 dataset
ChIP GM12891 ENCSR000EAI.RELA.GM12891 124 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 366 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 127 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 346 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 269 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF896IJG 130 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 322 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 302 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 56 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 95 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 169 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 141 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 265 bp overlap
SPI1 8 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 85 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 74 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 105 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 66 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 66 bp overlap
ChIP RS4-11 GSE71616.SPI1.RS4-11 58 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 72 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 50 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 56 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 133 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 194 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 264 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 90 bp overlap
YY1 2 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 140 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 191 bp overlap
ZNF217 1 dataset
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 70 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 206 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 183 bp overlap
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