chr7 : 54,188,796 54,189,634
838 bp 83 TFs 0 linked genes
This 838 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:54,183,796 – 54,194,634
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 368 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 209 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 267 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 166 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 87 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 245 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 295 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 157 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 125 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 252 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 192 bp overlap
Ebf4 2 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 392 bp overlap
ChIP DE DE-FOXA2-2 349 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 184 bp overlap
Foxq1 1 dataset
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 223 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 491 bp overlap
ChIP DE DE-GATA4-2 619 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 483 bp overlap
ChIP DE DE-GATA6-2 583 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 429 bp overlap
GLI3 2 datasets
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif ES_0h ES_0h-GLIS3_MA0737.1 14 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000BNR.HDAC2.WA01 164 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 160 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 186 bp overlap
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 182 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 139 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 131 bp overlap
MAF 2 datasets
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
MAF::NFE2 3 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
MAFA 2 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
MAFG::NFE2L1 3 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 84 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 234 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 160 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
NANOG 14 datasets
ChIP GM23338 ENCFF065NZG 277 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 221 bp overlap
ChIP H1 ENCFF747ZPQ 195 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 683 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 310 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 173 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 725 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 209 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 390 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 210 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 349 bp overlap
ChIP hESC GSE18292.NANOG.hESC 286 bp overlap
ChIP hESC GSE20650.NANOG.hESC 220 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 284 bp overlap
NR2F6 2 datasets
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Motif ES_0h ES_0h-NR2F6_MA1539.1 15 bp overlap
Nfe2l2 3 datasets
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
PAX4 1 dataset
Motif ES_0h ES_0h-PAX4_MA0068.2 8 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 172 bp overlap
ChIP GM23338 ENCFF333SNB 261 bp overlap
ChIP H1 ENCFF698ZAP 171 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 300 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 279 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 156 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 211 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 186 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 143 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 183 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 235 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 265 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 193 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 209 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 177 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 316 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 205 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 163 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 225 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 251 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 184 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 188 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 285 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 423 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX14 1 dataset
Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap
SOX15 3 datasets
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap
Motif ES_0h ES_0h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 276 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 260 bp overlap
SOX18 1 dataset
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX2 5 datasets
ChIP H9 GSE46837.SOX2.H9 173 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 211 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 242 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 293 bp overlap
SOX8 1 dataset
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 244 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 226 bp overlap
SRY 1 dataset
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
Sox5 1 dataset
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 199 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 248 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 189 bp overlap
TEAD4 4 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 236 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 238 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 221 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 209 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 356 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 340 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 539 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 261 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 476 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 221 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 170 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 156 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 234 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 138 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 241 bp overlap
ZNF708 1 dataset
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap