chr7 : 35,390,142 – 35,390,653
511 bp 109 TFs 2 linked genes
This 511 bp open chromatin element is linked to TBX20 and ENSG00000291133 and is bound by 109 transcription factors.
Linked Genes
2 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TBX20 136.3 kb Distal Multiome+HiCAR
ENSG00000291133 204.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:35,385,142 – 35,395,653
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
ARNTL 2 datasets
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 453 bp overlap
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 250 bp overlap
ATOH7 1 dataset
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
BACH1 1 dataset
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BRD4 2 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 120 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 384 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
E2F8 3 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
Motif DE_36h DE_36h-E2F8_MA0865.3 9 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 333 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_24h DE_24h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 348 bp overlap
ETV2::DRGX 1 dataset
Motif DE_24h DE_24h-ETV2DRGX_MA1940.2 12 bp overlap
ETV2::HOXB13 1 dataset
Motif DE_24h DE_24h-ETV2HOXB13_MA1943.2 13 bp overlap
ETV5::DRGX 1 dataset
Motif DE_24h DE_24h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::HOXA2 1 dataset
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
EZH2 2 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 498 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 362 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif DE_24h DE_24h-FLI1DRGX_MA1949.2 14 bp overlap
FOS::JUN 1 dataset
Motif DE_24h DE_24h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_24h DE_24h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_24h DE_24h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_24h DE_24h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 1 dataset
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 1 dataset
Motif DE_24h DE_24h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_24h DE_24h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_24h DE_24h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 3 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 1 dataset
Motif DE_24h DE_24h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_24h DE_24h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_24h DE_24h-FOSL2JUND_MA1144.2 9 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 379 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 315 bp overlap
HNF4A 2 datasets
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
Motif DE_24h DE_24h-HNF4A_MA1494.2 14 bp overlap
HOXC13 2 datasets
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
Motif DE_24h DE_24h-HOXC13_MA0907.2 9 bp overlap
INSM1 2 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Isl1 3 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif DE_24h DE_24h-Isl1_MA1608.2 7 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 471 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 264 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 486 bp overlap
JUNB 1 dataset
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_24h DE_24h-MAFF_MA0495.4 11 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Mafb 2 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_24h DE_24h-Mafb_MA0117.3 11 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NEUROG1 1 dataset
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
NFE2 2 datasets
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
Motif DE_24h DE_24h-NFE2_MA0841.2 10 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX6-3 3 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_24h DE_24h-NKX6-3_MA1530.2 8 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif DE_24h DE_24h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
NR1H2::RXRA 2 datasets
Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_24h DE_24h-NR1H2RXRA_MA0115.1 17 bp overlap
NRL 2 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 2 datasets
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 335 bp overlap
PPARA::RXRA 2 datasets
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_24h DE_24h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 2 datasets
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Motif DE_24h DE_24h-PPARD_MA1550.2 14 bp overlap
PRDM1 4 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif DE_24h DE_24h-PRDM1_MA0508.4 7 bp overlap
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_24h DE_24h-Pou5f1Sox2_MA0142.1 15 bp overlap
RXRB 2 datasets
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
Motif DE_24h DE_24h-RXRB_MA0855.1 14 bp overlap
RXRG 2 datasets
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Motif DE_24h DE_24h-RXRG_MA0856.1 14 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_24h DE_24h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
Rxra 2 datasets
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
Motif DE_24h DE_24h-Rxra_MA0512.2 14 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 298 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 396 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 511 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 493 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 469 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 489 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 384 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 511 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 422 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 258 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 261 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 201 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF21 1 dataset
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
VENTX 3 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_24h DE_24h-VENTX_MA0724.1 9 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF189 3 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif DE_24h DE_24h-ZNF667_MA1984.2 11 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap
ZNF93 3 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif DE_24h DE_24h-ZNF93_MA1721.2 14 bp overlap
Motif DE_36h DE_36h-ZNF93_MA1721.2 14 bp overlap
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