chr6 : 160,877,554 160,878,055
501 bp 62 TFs 3 linked genes
This 501 bp open chromatin element is linked to ENSG00000224371, ENSG00000292246, and MAP3K4 and is bound by 62 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ENSG00000224371 2.3 kb Proximal Proximity
ENSG00000292246 5.2 kb Proximal Proximity
MAP3K4 113.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:160,872,554 – 160,883,055
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 265 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 136 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 303 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 256 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 438 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 468 bp overlap
ChIP DE DE-FOXA2-2 416 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 501 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 501 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 172 bp overlap
HSF1 1 dataset
Motif ES_0h ES_0h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 347 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYBL1 1 dataset
Motif ES_0h ES_0h-MYBL1_MA0776.1 12 bp overlap
NANOG 9 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 423 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 330 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 312 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 501 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 338 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 312 bp overlap
ChIP hESC GSE20650.NANOG.hESC 254 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 149 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 245 bp overlap
ChIP K562 ENCFF167YID 232 bp overlap
NFIX 1 dataset
ChIP K562 ENCFF382SJS 179 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 8 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 398 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 303 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 501 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 194 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 332 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 383 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
REST 1 dataset
ChIP HEK293 ENCFF073DOT 199 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 501 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 264 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 411 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 329 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 363 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 389 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 424 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 319 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 197 bp overlap
STAT1 1 dataset
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 375 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 173 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 97 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 132 bp overlap
ZBTB26 1 dataset
Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 70 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 128 bp overlap
ZC3H11A 1 dataset
ChIP A549 ENCFF640AQE 96 bp overlap
ZNF140 1 dataset
ChIP HEK293 ENCFF501RUF 152 bp overlap
ZNF266 1 dataset
ChIP HEK293 ENCFF483FIW 144 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 182 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 185 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 136 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 191 bp overlap
ZNF426 2 datasets
ChIP HEK293 ENCFF957XYN 192 bp overlap
ChIP HEK293 ENCSR224NFP.ZNF426.HEK293 213 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 231 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 154 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 61 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 146 bp overlap
ZNF555 2 datasets
ChIP HEK293 ENCFF406QFI 70 bp overlap
ChIP HEK293 ENCSR767XSF.ZNF555.HEK293 132 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 158 bp overlap