MAP3K4
mitogen-activated protein kinase kinase kinase 4 | KIAA0213, MAPKKK4, MTK1, MEKK4

The central core of each mitogen-activated protein kinase (MAPK) pathway is a conserved cascade of 3 protein kinases: an activated MAPK kinase kinase (MAPKKK) phosphorylates and activates a specific MAPK kinase (MAPKK), which then activates a specific MAPK. While the ERK MAPKs are activated by mitogenic stimulation, the CSBP2 and JNK MAPKs are activated by environmental stresses such as osmotic shock, UV irradiation, wound stress, and inflammatory factors. This gene encodes a MAPKKK, the MEKK4 protein, also called MTK1. This protein contains a protein kinase catalytic domain at the C terminus. The N-terminal nonkinase domain may contain a regulatory domain. Expression of MEKK4 in mammalian cells activated the CSBP2 and JNK MAPK pathways, but not the ERK pathway. In vitro kinase studies indicated that recombinant MEKK4 can specifically phosphorylate and activate PRKMK6 and SERK1, MAPKKs that activate CSBP2 and JNK, respectively but cannot phosphorylate PRKMK1, an MAPKK that activates ERKs. MEKK4 is a major mediator of environmental stresses that activate the CSBP2 MAPK pathway, and a minor mediator of the JNK pathway. Several alternatively spliced transcripts encoding distinct isoforms have been described. [provided by RefSeq, May 2014]

Member of: DE-2 DE-2.8
Biological processes 18 terms
Expression (TPM)
MAP3K4 — as a Regulated Gene

TFs regulating MAP3K4 0 TFs

Transcription factors with Perturb-seq knockdown data for MAP3K4. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MAP3K4 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to MAP3K4

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MAP3K4, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr6:160,765,228–160,765,951 226.1 kb Distal (>10kb) Multiome 63
chr6:160,766,832–160,767,914 224.3 kb Distal (>10kb) Multiome 438
chr6:160,877,554–160,878,055 113.9 kb Distal (>10kb) Multiome 62
chr6:160,882,741–160,883,759 108.7 kb Distal (>10kb) Multiome 224
chr6:160,930,570–160,931,847 60.8 kb Distal (>10kb) Multiome 424
chr6:160,932,951–160,933,887 58.3 kb Distal (>10kb) Multiome 76
chr6:160,973,120–160,974,206 18.2 kb Distal (>10kb) Multiome 262
chr6:160,975,941–160,976,668 15.5 kb Distal (>10kb) Multiome 101
chr6:160,991,139–160,992,602 165 bp At TSS Multiome 919
chr6:160,992,862–160,993,050 1.1 kb Proximal (<10kb) 259
chr6:161,011,600–161,012,221 20.1 kb Distal (>10kb) Multiome 101
chr6:161,243,176–161,243,910 251.8 kb Distal (>10kb) Multiome 194
chr6:161,272,174–161,274,561 281.0 kb Distal (>10kb) Multiome 687

Genome Browser

Genomic view of the MAP3K4 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr6:160,755,228 – 161,284,561
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq