chr6 : 24,935,428 24,935,754
326 bp 58 TFs 2 linked genes
This 326 bp open chromatin element is linked to RIPOR2 and ENSG00000288887 and is bound by 58 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RIPOR2 205 bp At TSS Proximity
ENSG00000288887 289 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,930,428 – 24,940,754
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 61 bp overlap
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 55 bp overlap
ASH2L 3 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 289 bp overlap
ChIP H1 ENCFF399KAM 264 bp overlap
ChIP H1 ENCFF399KAM 56 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 222 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 169 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 194 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 79 bp overlap
BRD4 22 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 177 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 314 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 204 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 326 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 326 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 326 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 326 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 69 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 326 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 181 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 229 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 276 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 162 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 226 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 277 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 308 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 273 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 304 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 295 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 161 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 95 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 287 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 326 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 326 bp overlap
CTCF 12 datasets
ChIP B cell ENCFF500PZO 62 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 142 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 82 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 127 bp overlap
ChIP GM23338 ENCFF832KWE 273 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 149 bp overlap
ChIP brain ENCFF685VRG 96 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 275 bp overlap
ChIP esophagus squamous epithelium ENCFF571ODZ 51 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 53 bp overlap
ChIP neutrophil ENCSR785YRL.CTCF.neutrophil 231 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 75 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 80 bp overlap
ChIP BLaER1 ENCFF274GAT 78 bp overlap
ChIP BLaER1 ENCFF364PUR 75 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 117 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 172 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 173 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 302 bp overlap
ChIP peripheral-blood-mononuclear-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell 214 bp overlap
ChIP peripheral-blood-mononuclear-cell_mut GSE115772.EZH2.peripheral-blood-mononuclear-cell_mut 175 bp overlap
ChIP peripheral-blood-mononuclear-cell_mut GSE115772.EZH2.peripheral-blood-mononuclear-cell_mut 101 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 144 bp overlap
FOS 1 dataset
ChIP CD4 GSE116695.FOS.CD4 170 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 216 bp overlap
ChIP DE DE-FOXA2-1 286 bp overlap
ChIP DE DE-FOXA2-2 257 bp overlap
FOXO1 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE68349.FOXO1.B-cell_GERMINAL_CENTER 132 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 326 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 254 bp overlap
ChIP DE DE-GATA6-2 326 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 299 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 279 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF616FJX 82 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 326 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 317 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 239 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 308 bp overlap
JUN 2 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 326 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 58 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 326 bp overlap
KMT2A 6 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 216 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 326 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 245 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 202 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 207 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 202 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 192 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 322 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 89 bp overlap
MED1 1 dataset
ChIP P493-6_CMYC_24H GSE36354.MED1.P493-6_CMYC_24H 85 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 326 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 166 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 326 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 326 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 271 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 152 bp overlap
POLR2A 11 datasets
ChIP GM12878 ENCFF263VRI 81 bp overlap
ChIP GM12878 ENCFF899QYP 98 bp overlap
ChIP GM12891 ENCFF012SUT 102 bp overlap
ChIP GM12891 ENCFF127ICP 71 bp overlap
ChIP GM12891 ENCFF379FCI 67 bp overlap
ChIP GM18951 ENCFF079KKO 50 bp overlap
ChIP GM19099 ENCFF726IBN 55 bp overlap
ChIP GM23338 ENCFF450WCS 68 bp overlap
ChIP H1 ENCFF566JSR 143 bp overlap
ChIP spleen ENCFF446ZGT 93 bp overlap
ChIP vagina ENCFF384GAB 145 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 206 bp overlap
RAD21 4 datasets
ChIP lymphoblast GSE155324.RAD21.lymphoblast 82 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 59 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 326 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.RAD21.peripheral-blood-neutrophil_US-1 94 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 131 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 274 bp overlap
SIN3A 1 dataset
ChIP GM12878 ENCFF238GUI 58 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 128 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 138 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 326 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 326 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 326 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 326 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 326 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 133 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 276 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 205 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 281 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 303 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 173 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 102 bp overlap
ChIP peripheral-blood-neutrophil GSE126755.SMC3.peripheral-blood-neutrophil 135 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 326 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 181 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 300 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 63 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 95 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 221 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 70 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 121 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 99 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 94 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 112 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 196 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 176 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 99 bp overlap