chr5 : 167,305,858 – 167,306,335
477 bp 54 TFs 1 linked gene
This 477 bp open chromatin element is linked to ENSG00000254297 and is bound by 54 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000254297 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:167,300,858 – 167,311,335
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 277 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 273 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 220 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 118 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 232 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 358 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 416 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 307 bp overlap
BRD4 4 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 396 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 144 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 202 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 188 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 157 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 262 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 230 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 231 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 374 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 226 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 121 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 316 bp overlap
GATA3 5 datasets
ChIP BE2C GSE65664.GATA3.BE2C 174 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 172 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 164 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 214 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 163 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 441 bp overlap
GCM1 1 dataset
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 199 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 415 bp overlap
ChIP H1 ENCFF353UJQ 477 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 256 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 318 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 95 bp overlap
LEF1 1 dataset
ChIP hESC GSE64758.LEF1.hESC 246 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 438 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 146 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 238 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 472 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 339 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 227 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 477 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 477 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 376 bp overlap
ChIP hESC GSE20650.NANOG.hESC 221 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NIPBL 3 datasets
ChIP hESC GSE64758.NIPBL.hESC 208 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 259 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 261 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 184 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 221 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU5F1 12 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 301 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 403 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 284 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 450 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 156 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 327 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 286 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 202 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 477 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 312 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 239 bp overlap
Pou5f1::Sox2 1 dataset
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 223 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 327 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 433 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 333 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 124 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 275 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 139 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 365 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 373 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 470 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 369 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 221 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 350 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 399 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 253 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 293 bp overlap
ChIP hESC GSE18292.SOX2.hESC 139 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 337 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 222 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 175 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 308 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 237 bp overlap
TBP 2 datasets
ChIP hESC_10h GSE122298.TBP.hESC_10h 225 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 154 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 473 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 473 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 136 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 208 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 208 bp overlap
Yy1 1 dataset
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZNF331 1 dataset
ChIP GM23338 ENCFF410NSZ 222 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 477 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
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