chr5 : 105,688,326 105,688,955
629 bp 90 TFs 0 linked genes
This 629 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:105,683,326 – 105,693,955
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP GSE80256.AR.LNCaP 208 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 298 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 77 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 164 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 56 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 297 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 135 bp overlap
ATOH7 1 dataset
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap
BHLHE23 1 dataset
Motif DE_12h DE_12h-BHLHE23_MA0817.2 10 bp overlap
BRD3 1 dataset
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 219 bp overlap
BRD4 3 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 154 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 186 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 124 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 241 bp overlap
CTCF 32 datasets
ChIP BE2C ENCSR000DQD.CTCF.BE2C 201 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF531QOI 314 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H9 ENCFF152GTF 186 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 131 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 278 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 156 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 168 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 176 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 133 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 137 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 118 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 184 bp overlap
ChIP brain ENCFF099ASU 370 bp overlap
ChIP brain ENCFF163BBN 380 bp overlap
ChIP endodermal cell ENCFF471YCZ 141 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 173 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 193 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 177 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 195 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 149 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 196 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 130 bp overlap
ChIP neural progenitor cell ENCFF420RBO 246 bp overlap
ChIP neural progenitor cell ENCFF581WPG 410 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 194 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 325 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 491 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 251 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 162 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 161 bp overlap
ESR1 10 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 291 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 148 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 374 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 516 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 463 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 433 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 374 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 330 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 257 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 372 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 218 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 211 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 207 bp overlap
FOXA1 32 datasets
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 55 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 89 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 106 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 185 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 91 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 260 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 90 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 173 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 54 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 139 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 155 bp overlap
ChIP MCF-7 ENCFF465LTH 63 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 97 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 53 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 85 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 271 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 59 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 77 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 66 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 108 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 53 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 102 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 113 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 97 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 78 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 126 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 284 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 191 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 92 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 109 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 61 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 94 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 69 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 92 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 65 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 162 bp overlap
HOXB13 8 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 75 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 59 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 72 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 83 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 71 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 68 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 203 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 131 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 248 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 187 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 156 bp overlap
NEUROG1 1 dataset
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 303 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 232 bp overlap
OLIG1 1 dataset
Motif DE_12h DE_12h-OLIG1_MA0826.1 10 bp overlap
OLIG2 1 dataset
Motif DE_12h DE_12h-OLIG2_MA0678.1 10 bp overlap
OLIG3 1 dataset
Motif DE_12h DE_12h-OLIG3_MA0827.1 10 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 154 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 294 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 233 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 278 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 213 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 283 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 108 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 50 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 233 bp overlap
ZBTB18 2 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 237 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
ChIP HEK293T GSE78099.ZNF530.HEK293T 210 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap