chr5 : 75,461,092 – 75,461,361
269 bp 65 TFs 0 linked genes
This 269 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:75,456,092 – 75,466,361
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP GSE110655.AR.LNCaP 89 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 127 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 102 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 73 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 88 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 52 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 260 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 60 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 95 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 85 bp overlap
BCL6 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 231 bp overlap
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 199 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 203 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 172 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 161 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 206 bp overlap
ChIP GM12878 ENCFF521IZR 179 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 200 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 167 bp overlap
BRD4 7 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 230 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 269 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 269 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 269 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 269 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 239 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 90 bp overlap
CEBPB 2 datasets
ChIP Ishikawa ENCFF010USJ 238 bp overlap
ChIP Ishikawa ENCFF010USJ 67 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 226 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 210 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 216 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 221 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 122 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 137 bp overlap
EP300 4 datasets
ChIP Ishikawa ENCFF364ZWT 269 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 224 bp overlap
ChIP SK-N-SH ENCFF829RWA 123 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 59 bp overlap
ESR1 27 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 223 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 171 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 176 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 269 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 269 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 269 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 269 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 269 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 199 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 269 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 182 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 269 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 269 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 269 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 260 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 202 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 255 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 254 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 269 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 269 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 269 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 269 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 269 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 269 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 213 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 269 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 269 bp overlap
ESRRG 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 54 bp overlap
EZH2 1 dataset
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 100 bp overlap
FOXA1 6 datasets
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 69 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 80 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 92 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 89 bp overlap
ChIP primary-prostate-cancer_P1_DSG GSE114737.FOXA1.primary-prostate-cancer_P1_DSG 73 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 230 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP DE DE-FOXA2-2 269 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 93 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 269 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 133 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF178GBS 238 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 95 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 269 bp overlap
ChIP DE DE-GATA4-2 269 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 269 bp overlap
ChIP DE DE-GATA6-2 269 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 159 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 53 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 62 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 223 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 71 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 83 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 94 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF918AID 257 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 269 bp overlap
IRF4 1 dataset
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 143 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 168 bp overlap
ChIP SK-N-SH ENCFF285GEQ 186 bp overlap
KDM1A 1 dataset
ChIP SU-DHL-4 GSE119038.KDM1A.SU-DHL-4 137 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCFF064TDQ 269 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 224 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 143 bp overlap
MEF2B 3 datasets
ChIP DOHH2 GSE69558.MEF2B.DOHH2 124 bp overlap
ChIP KARPAS422 GSE69558.MEF2B.KARPAS422 84 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 255 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 113 bp overlap
MYC 2 datasets
ChIP LNCaP GSE117430.MYC.LNCaP 184 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 107 bp overlap
MYCN 2 datasets
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 210 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 224 bp overlap
NCOR2 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 139 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 269 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 225 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 144 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 116 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 78 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 234 bp overlap
RAD21 1 dataset
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 119 bp overlap
SMARCA4 1 dataset
ChIP NGP GSE134626.SMARCA4.NGP 67 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 222 bp overlap
SPI1 2 datasets
ChIP GM12891 ENCFF563IUT 160 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 116 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 127 bp overlap
STAT3 1 dataset
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 108 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 111 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 269 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 232 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 81 bp overlap
ChIP Ishikawa ENCFF772OTG 253 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 158 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 81 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_72h DE_72h-TFAP4FLI1_MA1967.2 14 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 179 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 224 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 189 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 189 bp overlap
USF1 1 dataset
ChIP Ishikawa ENCFF728IEG 236 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 252 bp overlap
ZIC4 1 dataset
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 154 bp overlap
ZNF416 1 dataset
Motif DE_72h DE_72h-ZNF416_MA1979.2 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 269 bp overlap
ZNF549 4 datasets
ChIP HEK293 ENCFF528IUI 186 bp overlap
ChIP HEK293 ENCFF565EYY 220 bp overlap
ChIP HEK293 ENCSR185QFX.ZNF549.HEK293 269 bp overlap
ChIP HEK293 GSE76494.ZNF549.HEK293 223 bp overlap
ZNF582 1 dataset
Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap
Zfp335 2 datasets
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 2 datasets
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
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