chr5 : 62,977,711 62,978,153
442 bp 91 TFs 0 linked genes
This 442 bp open chromatin element has no linked target genes and is bound by 91 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:62,972,711 – 62,983,153
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BRD4 2 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 442 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 442 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 289 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 442 bp overlap
CTCF 1 dataset
ChIP MDM_H5N1 GSE103477.CTCF.MDM_H5N1 151 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 166 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 283 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 4 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 368 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 169 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELK1 1 dataset
Motif DE_12h DE_12h-ELK1_MA0028.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 136 bp overlap
ERF 1 dataset
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 139 bp overlap
ETS1 2 datasets
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 178 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV3 1 dataset
Motif DE_12h DE_12h-ETV3_MA0763.2 9 bp overlap
ETV4 1 dataset
Motif DE_12h DE_12h-ETV4_MA0764.4 9 bp overlap
ETV6 1 dataset
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEV 1 dataset
Motif DE_12h DE_12h-FEV_MA0156.4 9 bp overlap
FLI1 12 datasets
ChIP A-673 GSE99959.FLI1.A-673 328 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 339 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 337 bp overlap
ChIP A-673_D10 GSE129155.FLI1.A-673_D10 192 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 283 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 320 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 319 bp overlap
Motif DE_12h DE_12h-FLI1_MA0475.3 9 bp overlap
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 352 bp overlap
ChIP SK-N-MC_SHFLI_48H GSE61944.FLI1.SK-N-MC_SHFLI_48H 224 bp overlap
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 195 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 332 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 289 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 160 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 361 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 442 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
MAX 4 datasets
ChIP H1 ENCFF601FOM 315 bp overlap
ChIP H1 ENCFF914VQY 215 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 167 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 324 bp overlap
MAX::MYC 1 dataset
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 127 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 442 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 310 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 175 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 166 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 266 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 142 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 338 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 301 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 141 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 314 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 301 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 199 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 220 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 438 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 132 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 368 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 182 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 172 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 188 bp overlap
SMARCA2 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 361 bp overlap
SMARCA4 3 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 304 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 255 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 199 bp overlap
SMARCC1 4 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 302 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 214 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 269 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 209 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 184 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 220 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 143 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 126 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 353 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 353 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 196 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 234 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 251 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Zbtb2 1 dataset
Motif DE_12h DE_12h-Zbtb2_MA2340.1 10 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap