chr5 : 50,989,517 50,990,098
581 bp 70 TFs 0 linked genes
This 581 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:50,984,517 – 50,995,098
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ATF2 1 dataset
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
BCL11A 1 dataset
Motif DE_60h DE_60h-BCL11A_MA2324.1 7 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 368 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 148 bp overlap
ESR1 1 dataset
Motif DE_60h DE_60h-ESR1_MA0112.4 15 bp overlap
ESR2 1 dataset
Motif DE_60h DE_60h-ESR2_MA0258.2 15 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 263 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 406 bp overlap
ChIP DE DE-FOXA2-2 334 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 581 bp overlap
ChIP DE DE-GATA4-2 581 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 482 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 581 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 581 bp overlap
ChIP DE DE-GATA6-2 581 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 388 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 460 bp overlap
ChIP foregut GSE117136.GATA6.foregut 377 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 408 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HNF4A 1 dataset
Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap
Hand1::Tcf3 2 datasets
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IRF5 1 dataset
Motif DE_60h DE_60h-IRF5_MA1420.1 14 bp overlap
KLF13 1 dataset
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
LIN54 1 dataset
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
MITF 6 datasets
ChIP 501-mel GSE137522.MITF.501-mel 399 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 230 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 408 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 368 bp overlap
Motif DE_60h DE_60h-MITF_MA0620.4 10 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 204 bp overlap
MLX 1 dataset
Motif DE_60h DE_60h-MLX_MA0663.1 10 bp overlap
MXI1 1 dataset
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 119 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 142 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 235 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 230 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 151 bp overlap
NR1D1 1 dataset
Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap
NR1I3 1 dataset
Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
NR6A1 1 dataset
Motif DE_60h DE_60h-NR6A1_MA1541.2 14 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 243 bp overlap
PAX6 1 dataset
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
PHOX2B 1 dataset
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
PPARD 1 dataset
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
Prdm14 1 dataset
Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap
RARA 1 dataset
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
RXRB 1 dataset
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 549 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 182 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 196 bp overlap
SREBF1 1 dataset
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_60h DE_60h-SREBF2_MA0828.3 10 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA1570.1 10 bp overlap
TFE3 2 datasets
Motif DE_60h DE_60h-TFE3_MA0831.3 10 bp overlap
ChIP K562 ENCFF697ABG 317 bp overlap
TFEB 1 dataset
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
USF1 1 dataset
Motif DE_60h DE_60h-USF1_MA0093.4 10 bp overlap
USF2 1 dataset
Motif DE_60h DE_60h-USF2_MA0526.5 10 bp overlap
Vdr 1 dataset
Motif DE_60h DE_60h-Vdr_MA0693.4 7 bp overlap
XBP1 1 dataset
Motif DE_60h DE_60h-XBP1_MA0844.2 11 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 75 bp overlap
ZNF692 1 dataset
Motif DE_60h DE_60h-ZNF692_MA1986.2 8 bp overlap