chr5 : 29,191,478 29,191,988
510 bp 69 TFs 1 linked gene
This 510 bp open chromatin element is linked to LINC02109 and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02109 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:29,186,478 – 29,196,988
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 437 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 56 bp overlap
BRD4 1 dataset
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 59 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 362 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 2 datasets
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF361KNY 82 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 479 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF570ABM 204 bp overlap
ChIP HepG2 ENCFF894AYY 97 bp overlap
ChIP HepG2 ENCFF894AYY 356 bp overlap
FOXA3 4 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
ChIP HepG2 ENCFF005KGL 332 bp overlap
ChIP K562 ENCFF348SOM 343 bp overlap
ChIP K562 ENCFF781VSC 216 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 422 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
ChIP K562 ENCFF245WKP 403 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE DE-GATA6-2 266 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 175 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 384 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
NR2C1 2 datasets
ChIP K562 ENCFF239KMA 112 bp overlap
ChIP K562 ENCFF568JLK 75 bp overlap
NR2C2 2 datasets
ChIP K562 ENCFF750AXF 510 bp overlap
ChIP K562 ENCFF750AXF 510 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 325 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 420 bp overlap
PHF8 1 dataset
ChIP K562 ENCFF217UCA 303 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF773DNG 224 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 354 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF967GRF 510 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 353 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TAF1 1 dataset
ChIP HeLa-S3 ENCFF556LCN 177 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 331 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
YY1 1 dataset
ChIP K562 ENCFF660QRE 290 bp overlap
ZBTB17 2 datasets
ChIP K562 ENCFF731UTU 388 bp overlap
ChIP K562 ENCFF731UTU 352 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 510 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF281 2 datasets
ChIP HepG2 ENCFF585QNU 144 bp overlap
ChIP K562 ENCFF594VNM 367 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF574 2 datasets
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
Motif DE_48h DE_48h-ZNF574_MA1982.2 14 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap