chr4 : 185,015,868 185,016,895
1,027 bp 63 TFs 1 linked gene
This 1.0 kb open chromatin element is linked to HELT and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HELT 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:185,010,868 – 185,021,895
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 215 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 215 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 785 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 1027 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 156 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 310 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 1027 bp overlap
BRD4 3 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 209 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 1027 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 1005 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 3 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 171 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 371 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 364 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 422 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 1015 bp overlap
CTCF 10 datasets
ChIP GM04604 GSE148179.CTCF.GM04604 138 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 132 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 159 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 226 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 203 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 148 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 254 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 154 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 196 bp overlap
CTCFL 2 datasets
ChIP FT282 GSE131931.CTCFL.FT282 156 bp overlap
ChIP FT282 GSE131931.CTCFL.FT282 208 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 407 bp overlap
ChIP BLaER1 ENCFF335XTP 537 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 171 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 218 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 113 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 288 bp overlap
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 39 datasets
ChIP A673 ENCFF790MVL 221 bp overlap
ChIP A673 ENCFF955JRZ 162 bp overlap
ChIP GM23248 ENCFF404ZHM 597 bp overlap
ChIP GM23338 ENCFF613YON 1027 bp overlap
ChIP GM23338 ENCFF886DXX 290 bp overlap
ChIP GM23338 ENCFF886DXX 542 bp overlap
ChIP H1 ENCFF232NZA 1027 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 290 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 336 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 467 bp overlap
ChIP SK-N-MC ENCFF434OHW 651 bp overlap
ChIP SK-N-MC ENCFF674XUJ 651 bp overlap
ChIP SK-N-MC ENCFF674XUJ 465 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 220 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 386 bp overlap
ChIP astrocyte ENCFF365JTP 472 bp overlap
ChIP astrocyte ENCFF365JTP 397 bp overlap
ChIP astrocyte ENCFF365JTP 434 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 93 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 151 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 803 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 459 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 683 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 1027 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 581 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 761 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 344 bp overlap
ChIP keratinocyte ENCFF070STK 611 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 202 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP myotube ENCFF857GWB 471 bp overlap
ChIP myotube ENCFF857GWB 471 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 722 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 98 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 1027 bp overlap
ChIP neural progenitor cell ENCFF472NFV 1027 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 193 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 649 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 699 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 775 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 699 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 301 bp overlap
HDAC2 3 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 148 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 275 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE107730.INO80.Hep-G2 276 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 89 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 118 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 407 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 343 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 126 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MYC 1 dataset
ChIP P493-6_24HR GSE125863.MYC.P493-6_24HR 298 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 245 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 741 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 228 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 326 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 248 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 917 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 283 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 309 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 1027 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 345 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 132 bp overlap
ChIP K562 ENCFF248CGR 187 bp overlap
ChIP K562 ENCFF957ORK 187 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 294 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 1027 bp overlap
ChIP H1 ENCFF239FFS 54 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 122 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 316 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 295 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 211 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 189 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 216 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 267 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 383 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 233 bp overlap
SMARCC1 4 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 258 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 598 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 201 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 500 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 134 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 323 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 272 bp overlap
SS18 2 datasets
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 307 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 456 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 178 bp overlap
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 568 bp overlap
SUZ12 9 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 303 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 1027 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 251 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 213 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 415 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 971 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 282 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 229 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 209 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 577 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 270 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 552 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 307 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 157 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 126 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 321 bp overlap
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 258 bp overlap