chr4 : 134,911,896 – 134,912,626

730 bp 101 TFs 0 linked genes

This 730 bp open chromatin element has no linked target genes and is bound by 101 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

101 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 514 bp overlap

Alx4 1 dataset

Motif DE_60h DE_60h-Alx4_MA0853.2 12 bp overlap

Arnt 1 dataset

Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap

Arx 1 dataset

Motif DE_60h DE_60h-Arx_MA0874.2 10 bp overlap

Atoh1 1 dataset

Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 139 bp overlap

CEBPG 1 dataset

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

EN2 1 dataset

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 129 bp overlap

FEZF2 2 datasets

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

FOXA1 1 dataset

Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap

FOXA2 5 datasets

ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 272 bp overlap

ChIP DE DE-FOXA2-1 592 bp overlap

ChIP DE DE-FOXA2-2 577 bp overlap

Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 444 bp overlap

FOXA3 1 dataset

Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap

FOXC2 1 dataset

Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap

FOXD1 1 dataset

Motif DE_60h DE_60h-FOXD1_MA0031.2 7 bp overlap

FOXF2 1 dataset

Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap

FOXI1 1 dataset

Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap

FOXK1 1 dataset

Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap

FOXO4 1 dataset

Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap

FOXP1 1 dataset

Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap

FOXP4 1 dataset

Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap

FOXS1 1 dataset

Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap

Foxf1 1 dataset

Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap

Foxl2 1 dataset

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

Foxo1 1 dataset

Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 297 bp overlap

ChIP DE DE-GATA4-1 598 bp overlap

ChIP DE DE-GATA4-2 573 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 444 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 521 bp overlap

ChIP DE DE-GATA6-2 411 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 529 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 279 bp overlap

ChIP foregut GSE117136.GATA6.foregut 260 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 439 bp overlap

GBX1 1 dataset

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HAND2 1 dataset

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HIF1A 1 dataset

Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

LBX1 1 dataset

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

MAX 2 datasets

Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 175 bp overlap

MLXIPL 1 dataset

Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MYC 1 dataset

Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap

MYCN 1 dataset

Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap

Mlxip 1 dataset

Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 238 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 658 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 637 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 697 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 635 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 531 bp overlap

ChIP hESC GSE18292.NANOG.hESC 158 bp overlap

NEUROD1 1 dataset

Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap

NFIL3 1 dataset

Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap

Neurod2 1 dataset

Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Npas2 1 dataset

Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU5F1 8 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 654 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 144 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 332 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 290 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 659 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 532 bp overlap

PROP1 1 dataset

Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap

PRRX2 1 dataset

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 507 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 432 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SMARCA4 3 datasets

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 329 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 711 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 596 bp overlap

SMARCB1 3 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 730 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 319 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 247 bp overlap

SMARCC1 3 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 573 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 707 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 360 bp overlap

SOHLH2 1 dataset

Motif DE_12h DE_12h-SOHLH2_MA1560.2 8 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 414 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 457 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 536 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 126 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TEAD4 1 dataset

ChIP hESC GSE99202.TEAD4.hESC 225 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 188 bp overlap

VENTX 1 dataset

Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap

ZNF354A 1 dataset

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 171 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

ZNF770 1 dataset

Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap