chr4 : 108,861,416 – 108,861,616
200 bp 67 TFs 0 linked genes
This 200 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:108,856,416 – 108,866,616
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 200 bp overlap
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 191 bp overlap
AR 2 datasets
ChIP A-375 GSE116189.AR.A-375 167 bp overlap
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 174 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 128 bp overlap
BHLHE22 1 dataset
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 3 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 200 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 161 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 200 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 113 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 71 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 200 bp overlap
ChIP WTC11 ENCFF297VCI 200 bp overlap
CTCF 1 dataset
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 107 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 200 bp overlap
ChIP K562 ENCFF053BWO 200 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 163 bp overlap
ESR1 22 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 100 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 134 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 121 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 200 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 192 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 164 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 159 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 158 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 153 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 181 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 161 bp overlap
ChIP MCF-7_IL1b-ICI GSE67295.ESR1.MCF-7_IL1b-ICI 155 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.ESR1.MCF-7_IL1b_45m 150 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 136 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 200 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 200 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 200 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 200 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 200 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 151 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 131 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 183 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 126 bp overlap
ESRRA 8 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 200 bp overlap
ChIP BT-474 GSE75876.ESRRA.BT-474 200 bp overlap
ChIP BT-474_AICAR GSE75876.ESRRA.BT-474_AICAR 200 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 200 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 200 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 200 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 200 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 200 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 200 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 128 bp overlap
GRHL2 2 datasets
Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 162 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 192 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 147 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 110 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 200 bp overlap
ChIP K562 ENCFF584AYC 200 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 200 bp overlap
NCOA2 2 datasets
ChIP MCF-7 ERP000901.NCOA2.MCF-7 153 bp overlap
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 117 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 122 bp overlap
NKX2-3 1 dataset
Motif ES_0h ES_0h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 165 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 200 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 158 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 133 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 136 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 189 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 183 bp overlap
Neurod2 1 dataset
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 137 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 200 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 135 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 128 bp overlap
RARA 2 datasets
ChIP HepG2 ENCFF582XUA 200 bp overlap
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 141 bp overlap
RCOR1 2 datasets
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 145 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 200 bp overlap
REST 69 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 200 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 200 bp overlap
ChIP A549 ENCFF148AIS 200 bp overlap
ChIP CD4 GSE49570.REST.CD4 200 bp overlap
ChIP GM12878 ENCFF235NGC 181 bp overlap
ChIP GM12878 ENCFF943QPB 174 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 200 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 200 bp overlap
ChIP GM23338 ENCFF024TCL 195 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 200 bp overlap
ChIP GP5D GSE51234.REST.GP5D 200 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 200 bp overlap
ChIP H1 ENCFF203SWY 200 bp overlap
ChIP H1 ENCFF429RUE 200 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 200 bp overlap
ChIP HCT116 ENCFF929AYY 195 bp overlap
ChIP HEK293 ENCFF073DOT 200 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 200 bp overlap
ChIP HL-60 ENCFF589LOF 200 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 200 bp overlap
ChIP HeLa-S3 ENCFF911DTC 200 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 200 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 200 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 200 bp overlap
ChIP HepG2 ENCFF122AWR 200 bp overlap
ChIP HepG2 ENCFF800JSL 178 bp overlap
ChIP Ishikawa ENCFF456OHV 200 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 200 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 200 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 200 bp overlap
ChIP K-562 GSE70482.REST.K-562 200 bp overlap
ChIP K562 ENCFF430APM 200 bp overlap
ChIP K562 ENCFF685YZN 200 bp overlap
ChIP K562 ENCFF688UKW 200 bp overlap
ChIP K562 ENCFF758CZL 200 bp overlap
ChIP MCF-7 ENCFF893RRD 200 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 200 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 200 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 200 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 200 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 197 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 159 bp overlap
ChIP PFSK-1 ENCFF668WMP 91 bp overlap
ChIP PFSK-1 ENCFF845VHA 181 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 200 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 192 bp overlap
ChIP Panc1 ENCFF338WSQ 191 bp overlap
ChIP Panc1 ENCFF518EEQ 200 bp overlap
ChIP Panc1 ENCFF629OJO 200 bp overlap
ChIP SK-N-SH ENCFF635KBN 187 bp overlap
ChIP SK-N-SH ENCFF861MKH 193 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 148 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 200 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 200 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 200 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 200 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 200 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 200 bp overlap
ChIP hepatocyte ERP000395.REST.hepatocyte 190 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 200 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 200 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 200 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 200 bp overlap
ChIP liver ENCFF240FWT 200 bp overlap
ChIP liver ENCFF577AZT 200 bp overlap
ChIP liver ENCSR867WPH.REST.liver 200 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 200 bp overlap
ChIP neural ENCSR000BTV.REST.neural 160 bp overlap
ChIP neural cell ENCFF882LXX 200 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 172 bp overlap
RXRA 4 datasets
ChIP H1 ENCFF570NHK 152 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 176 bp overlap
ChIP liver ENCFF077DAP 200 bp overlap
ChIP liver ENCFF807CIA 200 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 200 bp overlap
ChIP H1 ENCFF896IJG 200 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 198 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 136 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 140 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 171 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 162 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 200 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 175 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 200 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 181 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 175 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 124 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 200 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 106 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 106 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 106 bp overlap
SNAI2 4 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 200 bp overlap
ChIP keratinocyte_LacZ_DIFF GSE55421.SNAI2.keratinocyte_LacZ_DIFF 200 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 200 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 200 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 200 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 109 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 107 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 103 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 114 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 185 bp overlap
ChIP A549 ENCFF243FTL 177 bp overlap
TFAP4 3 datasets
ChIP DLD-1 GSE46935.TFAP4.DLD-1 200 bp overlap
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 161 bp overlap
ChIP LNCaP GSE28857.TFAP4.LNCaP 135 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 186 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ZBTB12 1 dataset
Motif ES_0h ES_0h-ZBTB12_MA1649.2 7 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 145 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 185 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF644 1 dataset
ChIP K-562 ENCSR729HVR.ZNF644.K-562 111 bp overlap
ZNF669 1 dataset
Motif ES_0h ES_0h-ZNF669_MA1985.1 15 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 200 bp overlap
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