chr4 : 108,160,821 108,161,152
331 bp 64 TFs 2 linked genes
This 331 bp open chromatin element is linked to LEF1 and LEF1-AS1 and is bound by 64 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LEF1 5.6 kb Proximal Proximity
LEF1-AS1 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:108,155,821 – 108,166,152
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 248 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 146 bp overlap
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 122 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 331 bp overlap
BCL11B 1 dataset
ChIP PBMC_T-reg GSE120872.BCL11B.PBMC_T-reg 111 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 173 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 106 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 290 bp overlap
BRD4 7 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 331 bp overlap
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 224 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 184 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 229 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 201 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 273 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 196 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 331 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 293 bp overlap
EP300 3 datasets
ChIP 697 GSE138031.EP300.697 72 bp overlap
ChIP H1 ENCFF927IYK 262 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 163 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 145 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 155 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE117492.ESR1.MCF-7 209 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 256 bp overlap
ChIP T-47D GSE74033.ESR1.T-47D 143 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 228 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 213 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 199 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 206 bp overlap
ETS1 3 datasets
ChIP CD4-pos GSE146787.ETS1.CD4-pos 150 bp overlap
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 318 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 164 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 61 bp overlap
FLI1 3 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 208 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 141 bp overlap
ChIP SEM GSE117864.FLI1.SEM 69 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
FOXP1 3 datasets
ChIP H9 GSE31006.FOXP1.H9 141 bp overlap
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 77 bp overlap
ChIP U2932 ERP010999.FOXP1.U2932 185 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 299 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 146 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 76 bp overlap
HDAC2 1 dataset
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 82 bp overlap
HDAC3 1 dataset
ChIP AML_shaml1-eto GSE131939.HDAC3.AML_shaml1-eto 154 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 331 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 331 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
KMT2A 4 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 266 bp overlap
ChIP L826 GSE83671.KMT2A.L826 207 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 331 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 331 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 72 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 203 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 213 bp overlap
MED1 2 datasets
ChIP Jurkat GSE59657.MED1.Jurkat 203 bp overlap
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 56 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 315 bp overlap
MYB 6 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 151 bp overlap
ChIP DU528 GSE94000.MYB.DU528 331 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 331 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 134 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 331 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 77 bp overlap
MYC 2 datasets
ChIP Jurkat GSE83777.MYC.Jurkat 88 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 159 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 113 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 331 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 170 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 291 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 226 bp overlap
ChIP hESC GSE18292.NANOG.hESC 142 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 189 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 255 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 331 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 202 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE115764.PAX5.NALM-6 293 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 57 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 261 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 331 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 331 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 219 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 331 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 215 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 222 bp overlap
REST 1 dataset
ChIP GM23338 ENCSR871KYB.REST.GM23338 88 bp overlap
RNF2 3 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 254 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 331 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 275 bp overlap
RUNX1 6 datasets
ChIP 697 GSE138031.RUNX1.697 139 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 251 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 265 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 81 bp overlap
ChIP Jurkat GSE29180.RUNX1.Jurkat 52 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 331 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 122 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 194 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 212 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 329 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 76 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 214 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 106 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 170 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 186 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 242 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 171 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 321 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 275 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 319 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 130 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 119 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 192 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 81 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 87 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 331 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 193 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 179 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 98 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 210 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 313 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 331 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 125 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 115 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 199 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 234 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 173 bp overlap