chr4 : 22,552,925 22,553,101
176 bp 65 TFs 0 linked genes
This 176 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:22,547,925 – 22,558,101
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
ATF2 1 dataset
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 152 bp overlap
BRD4 2 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 53 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 61 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CREM 1 dataset
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
CTCF 52 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 127 bp overlap
ChIP GM23338 ENCFF531QOI 176 bp overlap
ChIP GM23338 ENCFF772DML 140 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 176 bp overlap
ChIP H9 ENCFF152GTF 176 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 158 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 88 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 176 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 87 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 140 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 155 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 110 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 111 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF348BUL 137 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 120 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 135 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 118 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 176 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 146 bp overlap
ChIP MCF-7 ENCFF198DQX 171 bp overlap
ChIP MCF-7 ENCFF494VXA 171 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 122 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 140 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 176 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 142 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 90 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 171 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 176 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 176 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 176 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 176 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 153 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 176 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 176 bp overlap
ChIP endodermal cell ENCFF471YCZ 176 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 176 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 105 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 100 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 129 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 156 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 176 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 176 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 176 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 102 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 176 bp overlap
CTCFL 2 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 120 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 163 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 176 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 61 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 3 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 176 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 176 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 115 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 155 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 63 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 176 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 125 bp overlap
JUN 1 dataset
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 176 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 66 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 66 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
RAD21 5 datasets
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF360ZSW 162 bp overlap
ChIP HepG2 ENCFF906QIS 176 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 146 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 125 bp overlap
RUNX1 2 datasets
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 176 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 89 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 140 bp overlap
SMC1A 2 datasets
ChIP A-549 GSE76893.SMC1A.A-549 125 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 165 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 176 bp overlap
SPI1 3 datasets
ChIP HL-60 ENCFF645GBT 176 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 138 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 123 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 122 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF843EBZ 176 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 148 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 120 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 150 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 147 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 176 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 119 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 176 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 114 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 176 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 143 bp overlap
ZNF564 1 dataset
ChIP HepG2 ENCFF364ZIM 176 bp overlap