chr1 : 58,854,529 58,854,718
189 bp 66 TFs 0 linked genes
This 189 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:58,849,529 – 58,859,718
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 114 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 58 bp overlap
BRD4 5 datasets
ChIP HUVEC-C_modETS1 GSE93030.BRD4.HUVEC-C_modETS1 58 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 164 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 189 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 52 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 189 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 76 bp overlap
CEBPA 5 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 97 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 126 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 53 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 91 bp overlap
ChIP U-937 ERP008568.CEBPA.U-937 112 bp overlap
CEBPB 1 dataset
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 56 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 92 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 55 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 151 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 189 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF335XTP 58 bp overlap
ChIP BLaER1 ENCFF460KDD 189 bp overlap
ChIP BLaER1 ENCFF896HSY 189 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 165 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 134 bp overlap
ESR1 4 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 136 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 170 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 136 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 107 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 100 bp overlap
GATA1 2 datasets
ChIP K-562 ENCSR000EFT.GATA1.K-562 119 bp overlap
ChIP K562 ENCFF094CMK 189 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 154 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 152 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 189 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 189 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 60 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 189 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 189 bp overlap
ChIP DE DE-GATA4-2 189 bp overlap
ChIP foregut GSE117136.GATA4.foregut 189 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 189 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 175 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 189 bp overlap
ChIP DE DE-GATA6-1 189 bp overlap
ChIP DE DE-GATA6-2 189 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 189 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 189 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 189 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 189 bp overlap
ChIP foregut GSE117136.GATA6.foregut 189 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 189 bp overlap
GRHL2 5 datasets
ChIP HBE GSE46194.GRHL2.HBE 189 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 185 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 189 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 189 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 183 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 162 bp overlap
ChIP K562 ENCFF968WBH 189 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 121 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 189 bp overlap
ChIP K562 ENCFF055GAZ 189 bp overlap
ChIP K562 ENCFF317JJX 189 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 150 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 119 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 189 bp overlap
ChIP GM12878 ENCFF918AID 189 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 138 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 92 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 119 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 68 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 72 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 189 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 103 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 139 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 189 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 189 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 189 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 70 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 120 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 67 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 51 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF607ZPU 189 bp overlap
RAD21 2 datasets
ChIP RH4 GSE83726.RAD21.RH4 126 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 189 bp overlap
RELA 1 dataset
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 53 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 151 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 189 bp overlap
ChIP K562 ENCFF688UKW 150 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 50 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 107 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 179 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 172 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 183 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 104 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 90 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 189 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 189 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 54 bp overlap
SPI1 38 datasets
ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 78 bp overlap
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 108 bp overlap
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 161 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 163 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 130 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 137 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 177 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 94 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 164 bp overlap
ChIP GM12878 ENCFF134LCP 123 bp overlap
ChIP GM12891 ENCFF563IUT 97 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 138 bp overlap
ChIP HL-60 ENCFF645GBT 113 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 156 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 134 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 118 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 97 bp overlap
ChIP K562 ENCFF410ORC 73 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 120 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 144 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 189 bp overlap
ChIP ME-1 GSE46044.SPI1.ME-1 189 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 154 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 114 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 153 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 111 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 139 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 180 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 109 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 146 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 121 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 124 bp overlap
ChIP primary-B-cell_donorC GSE128834.SPI1.primary-B-cell_donorC 136 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 144 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 94 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 103 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 133 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 122 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 122 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 134 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 185 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 181 bp overlap
STAT1 1 dataset
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 87 bp overlap
STAT3 3 datasets
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 173 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 119 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 100 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 124 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 90 bp overlap
TFCP2 1 dataset
ChIP K562 ENCFF984WXL 189 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 189 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 186 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 189 bp overlap