chr2 : 183,408,397 – 183,409,259
862 bp 98 TFs 0 linked genes
This 862 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:183,403,397 – 183,414,259
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 477 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 281 bp overlap
BARX1 3 datasets
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BARX2 1 dataset
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 263 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 378 bp overlap
BSX 3 datasets
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPB 2 datasets
Motif ES_0h ES_0h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 261 bp overlap
CEBPE 1 dataset
Motif ES_0h ES_0h-CEBPE_MA0837.3 10 bp overlap
CEBPG 2 datasets
Motif ES_0h ES_0h-CEBPG_MA0838.1 10 bp overlap
Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 451 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 482 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 428 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 287 bp overlap
DLX1 3 datasets
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 3 datasets
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 3 datasets
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 3 datasets
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
E2F2 1 dataset
Motif ES_0h ES_0h-E2F2_MA0864.3 13 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 307 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 357 bp overlap
GBX2 3 datasets
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GCM1 1 dataset
Motif ES_0h ES_0h-GCM1_MA0646.2 10 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 116 bp overlap
HESX1 3 datasets
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HNRNPK 3 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 204 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF493GNS 511 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXA7 3 datasets
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
Hmx1 2 datasets
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Hmx3 2 datasets
Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap
Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 305 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 327 bp overlap
KLF4 1 dataset
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 202 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LBX2 3 datasets
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 208 bp overlap
LHX2 3 datasets
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MSX1 3 datasets
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 3 datasets
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 3 datasets
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 432 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 862 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 770 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 777 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 862 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NFIL3 1 dataset
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
NIPBL 3 datasets
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 377 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 365 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 407 bp overlap
NONO 1 dataset
ChIP K562 ENCFF844WQC 189 bp overlap
Nobox 3 datasets
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 491 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 10 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 530 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 502 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 400 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 268 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 825 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 329 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 148 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 731 bp overlap
Pou5f1::Sox2 4 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 230 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 174 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 256 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 602 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 498 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 593 bp overlap
RAX 3 datasets
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 245 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 230 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 259 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 600 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 345 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 329 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 215 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 862 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 795 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 614 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 790 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 290 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 475 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 742 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 550 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 191 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
TCF7L1 2 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 3 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD2 2 datasets
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 5 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 543 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 379 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 638 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF324 5 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF354A 1 dataset
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 338 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
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