chr2 : 118,854,425 118,855,264
839 bp 70 TFs 1 linked gene
This 839 bp open chromatin element is linked to EN1 and is bound by 70 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
EN1 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:118,849,425 – 118,860,264
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 239 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 183 bp overlap
BACH1 2 datasets
ChIP WA01 ENCSR000EBQ.BACH1.WA01 126 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 135 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 80 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 530 bp overlap
BRD4 2 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 87 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 278 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 221 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 591 bp overlap
ChIP H1 ENCFF329MAX 526 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 458 bp overlap
CTCF 31 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 186 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 89 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 215 bp overlap
ChIP C4-2B ENCFF821XVN 151 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 110 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 69 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 152 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 217 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 57 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 103 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 205 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 226 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 103 bp overlap
ChIP Panc1 ENCFF056JQX 126 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 180 bp overlap
ChIP RWPE2 ENCFF911IEE 155 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 384 bp overlap
ChIP VCaP ENCFF858YQT 52 bp overlap
ChIP brain ENCFF685VRG 62 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 211 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 323 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 56 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 55 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 118 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 163 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 50 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 95 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 104 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 153 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 113 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 137 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 383 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 186 bp overlap
EGR1 2 datasets
Motif ES_0h ES_0h-EGR1_MA0162.5 10 bp overlap
ChIP H1 ENCFF451BLH 184 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 243 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 288 bp overlap
EZH2 21 datasets
ChIP A673 ENCFF790MVL 563 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 186 bp overlap
ChIP GM23338 ENCFF613YON 513 bp overlap
ChIP H1 ENCFF232NZA 839 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 608 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 473 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 622 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 325 bp overlap
ChIP SK-N-SH ENCFF657FZK 173 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 661 bp overlap
ChIP fibroblast of lung ENCFF479BAW 496 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 706 bp overlap
ChIP hepatocyte ENCFF552DZB 212 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 695 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 58 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 231 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 839 bp overlap
ChIP neural progenitor cell ENCFF472NFV 839 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 225 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 336 bp overlap
GATA6 4 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 421 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 537 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 69 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 421 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 102 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 518 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 302 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 213 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 635 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 218 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 698 bp overlap
JUN 7 datasets
ChIP A549 ENCFF846DUV 58 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 346 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 663 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 252 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 436 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 589 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 668 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 302 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 76 bp overlap
KLF4 1 dataset
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 92 bp overlap
MYB 1 dataset
ChIP U-937_vehicle-treated_MYB GSE98006.MYB.U-937_vehicle-treated_MYB 223 bp overlap
NANOG 3 datasets
ChIP WA09 GSE105028.NANOG.WA09 191 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 203 bp overlap
ChIP hESC GSE18292.NANOG.hESC 77 bp overlap
NR2C2 1 dataset
ChIP HepG2 ENCFF944PRH 92 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 218 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 546 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 82 bp overlap
PLAG1 1 dataset
Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 839 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 491 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 74 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 266 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 213 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 680 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 153 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 96 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 56 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 80 bp overlap
RARA 2 datasets
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 268 bp overlap
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 254 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 225 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 92 bp overlap
ChIP H1 ENCFF239FFS 595 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 639 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 272 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 335 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 673 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 53 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 697 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 481 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 647 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 271 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 112 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 431 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 674 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 231 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 248 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 134 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 210 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 324 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 407 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 225 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 481 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 214 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 348 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 165 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 244 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 201 bp overlap
SS18 4 datasets
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 208 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 334 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 510 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 245 bp overlap
SUZ12 9 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 839 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 215 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 337 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 191 bp overlap
ChIP NT2/D1 ENCFF574SXS 70 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 577 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 177 bp overlap
Spz1 1 dataset
Motif ES_0h ES_0h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 191 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 408 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 157 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 159 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 160 bp overlap
YY2 1 dataset
Motif ES_0h ES_0h-YY2_MA0748.3 7 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 265 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 143 bp overlap
ZNF740 1 dataset
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
ZNF789 1 dataset
ChIP HEK293T GSE78099.ZNF789.HEK293T 298 bp overlap