chr2 : 104,563,522 104,563,894
372 bp 68 TFs 0 linked genes
This 372 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:104,558,522 – 104,568,894
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP GSE110655.AR.LNCaP 164 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 75 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 124 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 195 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 215 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 247 bp overlap
ChIP HepG2 ENCFF955VER 144 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
BRD4 4 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 276 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 213 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 164 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CREB1 4 datasets
ChIP LNCaP GSE63034.CREB1.LNCaP 102 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 164 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 309 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 268 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 254 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 144 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 156 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 211 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 23 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 351 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 197 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 244 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 197 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 243 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 133 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 180 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 169 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 169 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 165 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 241 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 170 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 189 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 111 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 368 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 134 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 150 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 161 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 222 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 248 bp overlap
ChIP breast_tumor_Female_7 GSE104399.FOXA1.breast_tumor_Female_7 166 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 227 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 287 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 101 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 101 bp overlap
HIF1A 2 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 123 bp overlap
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 175 bp overlap
HOXB13 1 dataset
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 87 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 306 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 267 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 194 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 257 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 152 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 181 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 198 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 102 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
PPARG 1 dataset
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 114 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 175 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 218 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 59 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 372 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT3 6 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 252 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 365 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 290 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 115 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 139 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 304 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 116 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 176 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 169 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 213 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 150 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap