chr2 : 77,018,190 77,018,597
407 bp 78 TFs 0 linked genes
This 407 bp open chromatin element has no linked target genes and is bound by 78 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:77,013,190 – 77,023,597
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 170 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 251 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1 GSE102697.CEBPA.Kasumi-1 145 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 332 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 334 bp overlap
EP300 1 dataset
ChIP neural cell ENCFF442QNK 356 bp overlap
ESR1 14 datasets
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 285 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 200 bp overlap
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 192 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 265 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 192 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 162 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 265 bp overlap
ChIP MCF-7_Veh GSE95302.ESR1.MCF-7_Veh 148 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 372 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 196 bp overlap
ChIP MCF-7_shFbxo_E2_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_SRC-3 160 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 196 bp overlap
ChIP MCF-7_shFbxo_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_SRC-3 160 bp overlap
ChIP MCF-7_shKMT2C_R GSE100328.ESR1.MCF-7_shKMT2C_R 93 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 342 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 279 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 357 bp overlap
FOXA1 23 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 359 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 310 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 407 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 239 bp overlap
ChIP MCF-7 GSE128445.FOXA1.MCF-7 195 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 187 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 172 bp overlap
ChIP MCF-7 GSE95302.FOXA1.MCF-7 165 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 177 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 218 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 202 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 160 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 157 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 170 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 193 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 274 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 248 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 237 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 225 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 255 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 112 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 117 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 242 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 237 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 359 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 308 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 135 bp overlap
ChIP DE DE-FOXA2-1 407 bp overlap
ChIP DE DE-FOXA2-2 407 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 233 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 99 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 99 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 84 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 182 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF437NQS 218 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 94 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 407 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 407 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 238 bp overlap
ChIP foregut GSE117136.GATA4.foregut 407 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 407 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 258 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 177 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 202 bp overlap
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 407 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 407 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 407 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 246 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 256 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 264 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 407 bp overlap
ChIP foregut GSE117136.GATA6.foregut 407 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 377 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 407 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 319 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 266 bp overlap
Gfi1B 1 dataset
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 219 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 243 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 342 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 303 bp overlap
Isl1 1 dataset
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 344 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 373 bp overlap
KDM1A 2 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 137 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 221 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 141 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 362 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 407 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 285 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 247 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 407 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 407 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 407 bp overlap
ChIP hESC GSE18292.NANOG.hESC 226 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 184 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 180 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHG.NR3C1.A-549 120 bp overlap
ChIP MCF-7 GSE152203.NR3C1.MCF-7 112 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 152 bp overlap
OTX2 2 datasets
ChIP WTC11 ENCFF634NAO 245 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 274 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 320 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 228 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 215 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 314 bp overlap
POU1F1 1 dataset
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F3 1 dataset
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 177 bp overlap
POU5F1 4 datasets
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 310 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 304 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 387 bp overlap
PROX1 1 dataset
Motif DE_60h DE_60h-PROX1_MA0794.1 12 bp overlap
REL 1 dataset
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RELA 3 datasets
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 291 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 165 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 219 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 182 bp overlap
ChIP neural cell ENCFF882LXX 407 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 167 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 407 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 407 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 344 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 407 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 160 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 185 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 161 bp overlap
SMARCA4 6 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 407 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 205 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 297 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 243 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 407 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 343 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 407 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 309 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 402 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 354 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 353 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 371 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 407 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 318 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 269 bp overlap
STAT1 1 dataset
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 257 bp overlap
TCF7 1 dataset
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 182 bp overlap
ZIM3 1 dataset
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF677 1 dataset
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap