chr2 : 37,342,701 – 37,343,072
371 bp 64 TFs 1 linked gene
This 371 bp open chromatin element is linked to QPCT and is bound by 64 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
QPCT 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:37,337,701 – 37,348,072
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 283 bp overlap
BRD4 4 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 188 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 247 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 336 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 248 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 205 bp overlap
CDK7 2 datasets
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 147 bp overlap
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 107 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 250 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 156 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 216 bp overlap
CTCF 5 datasets
ChIP CD14-positive monocyte ENCFF087XLR 371 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 341 bp overlap
ChIP endodermal cell ENCFF471YCZ 235 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 139 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 100 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 329 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 183 bp overlap
EP300 3 datasets
ChIP AML GSE131939.EP300.AML 111 bp overlap
ChIP SK-N-SH ENCFF829RWA 195 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 83 bp overlap
ERG 2 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 158 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 163 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 165 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 265 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 135 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 194 bp overlap
GATA2 6 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 209 bp overlap
ChIP SH-SY5Y ENCFF485YIB 307 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 275 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 100 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 138 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 253 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 268 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 371 bp overlap
ChIP DE DE-GATA6-2 371 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 371 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 371 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 344 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 371 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 371 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 371 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 297 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 169 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 155 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 146 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 301 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 210 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 165 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 168 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 157 bp overlap
LMO2 2 datasets
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 150 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 163 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 135 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 222 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 131 bp overlap
MYOD1 4 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 275 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 218 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 260 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 111 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 163 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 194 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 206 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 213 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 371 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 147 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 371 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 128 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 366 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 258 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 193 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 149 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 153 bp overlap
RELA 14 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 136 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 132 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 180 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 316 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 106 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 102 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 123 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 139 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 122 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 142 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 113 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 114 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 111 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 117 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 198 bp overlap
RUNX1 5 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 173 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 187 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 187 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 173 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 130 bp overlap
SMAD2 3 datasets
ChIP hESC GSE29422.SMAD2.hESC 321 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 371 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 316 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 371 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 371 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 371 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 371 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 371 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 371 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 371 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 102 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 216 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 130 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 239 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 202 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 172 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 177 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 371 bp overlap
TAL1 3 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 193 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 179 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 115 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 186 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 371 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 181 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 371 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 237 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 121 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 121 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 211 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 85 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 269 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 193 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 173 bp overlap
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