QPCT
glutaminyl-peptide cyclotransferase | GCT, QC
QPCT — as a Regulated Gene

TFs regulating QPCT 0 TFs

Transcription factors with Perturb-seq knockdown data for QPCT. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = QPCT upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to QPCT

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of QPCT, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr2:37,083,780–37,086,187 258.9 kb Distal (>10kb) Multiome 938
chr2:37,156,055–37,157,536 187.8 kb Distal (>10kb) Multiome 702
chr2:37,231,272–37,232,043 113.1 kb Distal (>10kb) Multiome 891
chr2:37,305,706–37,306,783 38.6 kb Distal (>10kb) Multiome 129
chr2:37,323,791–37,325,583 19.9 kb Distal (>10kb) Multiome 835
chr2:37,342,701–37,343,072 1.7 kb Proximal (<10kb) 64
chr2:37,343,562–37,343,747 979 bp At TSS 106
chr2:37,344,501–37,345,213 at TSS At TSS 401
chr2:37,443,019–37,443,805 98.7 kb Distal (>10kb) Multiome 55
chr2:37,535,945–37,536,470 191.5 kb Distal (>10kb) Multiome 211

Genome Browser

Genomic view of the QPCT locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr2:37,073,780 – 37,546,470
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq