chrX : 138,710,307 138,710,745
438 bp 60 TFs 2 linked genes
This 438 bp open chromatin element is linked to FGF13-AS1 and FGF13 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FGF13-AS1 705 bp At TSS Proximity
FGF13 971 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:138,705,307 – 138,715,745
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 176 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 310 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 233 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 163 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 438 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 438 bp overlap
BRD4 2 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 313 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 438 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 93 bp overlap
ChIP hESC GSE133412.CBX7.hESC 113 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 438 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 208 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 124 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 180 bp overlap
ESR1 16 datasets
ChIP MCF-7 GSE45822.ESR1.MCF-7 225 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 274 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 217 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 155 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 120 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 246 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 214 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 180 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 321 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 159 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 205 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 304 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 181 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 193 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 193 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 338 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 207 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 277 bp overlap
EZH2 14 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 153 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 377 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 369 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 308 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 149 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 184 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 388 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 71 bp overlap
ChIP hepatocyte ENCFF552DZB 61 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 438 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 438 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 275 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 438 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 232 bp overlap
GLIS2 3 datasets
ChIP HEK293 ENCFF446EIF 411 bp overlap
ChIP HEK293 ENCFF446EIF 212 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 438 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 152 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 226 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 71 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 76 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 438 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 213 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 224 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 110 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 111 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 162 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 94 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 101 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 239 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 222 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 151 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 438 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 195 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 295 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 237 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 155 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 301 bp overlap
SAP30 2 datasets
ChIP WA01 ENCSR000ATR.SAP30.WA01 326 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 52 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 140 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 160 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 170 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 251 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 194 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 303 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 438 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 203 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 302 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 160 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 219 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 94 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 88 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 149 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 128 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 149 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 271 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 219 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 438 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 98 bp overlap
ZBTB20 4 datasets
ChIP HEK293 ENCFF524ADK 107 bp overlap
ChIP HEK293 ENCFF524ADK 317 bp overlap
ChIP HEK293 ENCFF524ADK 226 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 438 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 247 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 134 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 296 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 254 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 144 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 232 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 105 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 438 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 438 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 205 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 182 bp overlap