chr22 : 36,161,582 36,162,255
673 bp 66 TFs 3 linked genes
This 673 bp open chromatin element is linked to APOL3, RBFOX2, and MYH9 and is bound by 66 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
APOL3 827 bp At TSS Proximity
RBFOX2 133.1 kb Distal Multiome
MYH9 226.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:36,156,582 – 36,167,255
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 91 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 102 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 110 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 79 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 57 bp overlap
BRD4 12 datasets
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 126 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 91 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 139 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 67 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 230 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 291 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 251 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 245 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 55 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 128 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 74 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 127 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 59 bp overlap
CD74 1 dataset
ChIP CLL_p4 GSE88955.CD74.CLL_p4 84 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 117 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 186 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 102 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 77 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 255 bp overlap
EGR1 1 dataset
ChIP GM12878 ENCFF092DJY 211 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 256 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 549 bp overlap
ChIP DE DE-FOXA2-2 563 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE29180.GATA3.Jurkat 294 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 461 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 665 bp overlap
ChIP DE DE-GATA4-2 670 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 659 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 622 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 662 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 657 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 657 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 673 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 649 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 606 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 302 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF238LYK 239 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 273 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 73 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 324 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 621 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 453 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 554 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 61 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 130 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 144 bp overlap
MAX 1 dataset
ChIP GM12878 ENCFF849VCQ 136 bp overlap
MED1 5 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 182 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 111 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 77 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 119 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 108 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 152 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 69 bp overlap
MYB 5 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 339 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 673 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 139 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 125 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 63 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 50 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 537 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 59 bp overlap
NFKB1 2 datasets
ChIP CD4-pos GSE126505.NFKB1.CD4-pos 89 bp overlap
ChIP CD4-pos_ID206 GSE126505.NFKB1.CD4-pos_ID206 86 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 336 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 150 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 76 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF503GOV 57 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 70 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 68 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 117 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 324 bp overlap
RELA 9 datasets
ChIP 786-O GSE86092.RELA.786-O 96 bp overlap
ChIP 786-O GSE86092.RELA.786-O 145 bp overlap
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 51 bp overlap
ChIP GM12878 ENCFF513IEN 164 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 96 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 122 bp overlap
ChIP GM12892 ENCSR000EAN.RELA.GM12892 71 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 152 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 130 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 167 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 188 bp overlap
RUNX1 6 datasets
ChIP 697 GSE138031.RUNX1.697 247 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 53 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 53 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 293 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 204 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 186 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 57 bp overlap
ChIP PER-117 GSE151819.RUNX2.PER-117 244 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 73 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 124 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 72 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W GSE138496.SMAD2-3.HGrC1_C134W 130 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 673 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 673 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 673 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 622 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 673 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 639 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 649 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 673 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 208 bp overlap
SMARCA4 1 dataset
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 112 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 398 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 602 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 88 bp overlap
STAT5B 1 dataset
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 84 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 226 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 239 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 199 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 117 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 118 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 344 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 222 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 79 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 112 bp overlap
ZIM3 1 dataset
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
ZNF382 1 dataset
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
ZNF449 1 dataset
Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap
ZNF544 1 dataset
ChIP HEK293 ENCFF605PGR 325 bp overlap
ZNF85 1 dataset
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap