chr20 : 41,023,627 – 41,023,825
198 bp 55 TFs 1 linked gene
This 198 bp open chromatin element is linked to TOP1 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TOP1 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:41,018,627 – 41,028,825
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 198 bp overlap
ChIP K562 ENCFF938UXQ 198 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 107 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 198 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 198 bp overlap
ChIP K562 ENCFF963TXY 198 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 198 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 166 bp overlap
ChIP K562 ENCFF673OEZ 198 bp overlap
CCNT2 1 dataset
ChIP K-562 ENCSR000DOA.CCNT2.K-562 69 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 113 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 198 bp overlap
ChIP K562 ENCFF403WPG 136 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 184 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 198 bp overlap
EGR1 4 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 198 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 144 bp overlap
ChIP K562 ENCFF006PJY 198 bp overlap
ChIP K562 ENCFF895KGN 198 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 69 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 163 bp overlap
ChIP K562 ENCFF226VMS 198 bp overlap
FOXM1 2 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 170 bp overlap
ChIP K562 ENCFF255RHV 198 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 188 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 131 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 198 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 131 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 124 bp overlap
ChIP K562 ENCFF513FTZ 198 bp overlap
ChIP K562 ENCFF544PCK 186 bp overlap
ChIP K562 ENCFF830LLA 198 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 198 bp overlap
ChIP foregut GSE117136.GATA4.foregut 198 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 198 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 198 bp overlap
ChIP DE DE-GATA6-2 198 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 198 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 198 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 198 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 198 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 198 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 198 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 198 bp overlap
ChIP foregut GSE117136.GATA6.foregut 198 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 198 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 183 bp overlap
ChIP K562 ENCFF968WBH 198 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 198 bp overlap
ChIP K562 ENCFF744ALD 198 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 157 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 198 bp overlap
ChIP K562 ENCFF348IBL 198 bp overlap
ChIP K562 ENCFF771OHZ 198 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 124 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 157 bp overlap
ChIP K562 ENCFF464PIV 198 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 196 bp overlap
ChIP K562 ENCFF320EQC 92 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 152 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 141 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 107 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 99 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR113LAS.MTA2.K-562 193 bp overlap
ChIP K-562 ENCSR411UYA.MTA2.K-562 138 bp overlap
ChIP K562 ENCFF880VZB 97 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 198 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 198 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 157 bp overlap
ChIP K562 ENCFF788MPU 198 bp overlap
ChIP K562 ENCFF866HRM 145 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 198 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 162 bp overlap
ChIP K562 ENCFF167YID 198 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 124 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 156 bp overlap
ChIP K562 ENCFF801LKH 198 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 198 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 198 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 196 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 198 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 198 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 198 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 198 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 198 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 198 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 198 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 198 bp overlap
ChIP K562 ENCFF506JCB 198 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 198 bp overlap
ChIP K562 ENCFF690CFF 198 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 198 bp overlap
ChIP K562 ENCFF059YCJ 198 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 163 bp overlap
TAL1 11 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 198 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 192 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 172 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 83 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 89 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 151 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 151 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 132 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 180 bp overlap
ChIP K562 ENCFF620GMX 189 bp overlap
ChIP K562 ENCFF661CCK 57 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 198 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 198 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 175 bp overlap
ChIP K562 ENCFF909RDY 198 bp overlap
ChIP K562 ENCFF931DJY 190 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 198 bp overlap
ChIP K562 ENCFF319QZT 71 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 180 bp overlap
TRIM24 3 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 198 bp overlap
ChIP K562 ENCFF284DKY 198 bp overlap
ChIP K562 ENCFF616RIL 119 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 198 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 198 bp overlap
ChIP K562 ENCFF795CMH 190 bp overlap
ChIP K562 ENCFF975RXS 176 bp overlap
ZMIZ1 1 dataset
ChIP K562 ENCFF647WJV 198 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 198 bp overlap
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