chr20 : 21,513,279 – 21,513,573
294 bp 68 TFs 2 linked genes
This 294 bp open chromatin element is linked to NKX2-2 and ENSG00000289431 and is bound by 68 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NKX2-2 490 bp At TSS Proximity
ENSG00000289431 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:21,508,279 – 21,518,573
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 259 bp overlap
ASH2L 2 datasets
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 154 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 294 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 294 bp overlap
BRD2 4 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 294 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 294 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 95 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 200 bp overlap
BRD4 8 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 211 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 99 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 228 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 219 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 56 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 229 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 294 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 238 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 156 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 209 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 294 bp overlap
CDK8 1 dataset
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 235 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 231 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 142 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 294 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 294 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 243 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 207 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 132 bp overlap
EGR1 2 datasets
ChIP A-375 GSE116190.EGR1.A-375 235 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 155 bp overlap
ELF1 2 datasets
ChIP A-549 GSE122203.ELF1.A-549 115 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 188 bp overlap
ESR1 26 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 223 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 256 bp overlap
ChIP T-47D GSE74033.ESR1.T-47D 148 bp overlap
ChIP T-47D GSE84593.ESR1.T-47D 140 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 104 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 89 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 188 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 294 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 231 bp overlap
ChIP T-47D_E2 GSE125594.ESR1.T-47D_E2 211 bp overlap
ChIP T-47D_JC4726 GSE126004.ESR1.T-47D_JC4726 190 bp overlap
ChIP T-47D_JC4727 GSE126004.ESR1.T-47D_JC4727 158 bp overlap
ChIP T-47D_JC4729 GSE126004.ESR1.T-47D_JC4729 149 bp overlap
ChIP T-47D_JC4730 GSE126004.ESR1.T-47D_JC4730 141 bp overlap
ChIP T-47D_JC4732 GSE126004.ESR1.T-47D_JC4732 215 bp overlap
ChIP T-47D_JC4733 GSE126004.ESR1.T-47D_JC4733 142 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 294 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 146 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 258 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 183 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 200 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 222 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 228 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 234 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 262 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 182 bp overlap
ESR1_Y537S 3 datasets
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 207 bp overlap
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 192 bp overlap
ChIP T-47D_dox_E2 GSE94493.ESR1_Y537S.T-47D_dox_E2 153 bp overlap
EZH2 23 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 294 bp overlap
ChIP GM23248 ENCFF404ZHM 91 bp overlap
ChIP GM23338 ENCFF613YON 294 bp overlap
ChIP GM23338 ENCFF886DXX 294 bp overlap
ChIP H1 ENCFF232NZA 294 bp overlap
ChIP PC-3 ENCFF928VSN 184 bp overlap
ChIP astrocyte ENCFF365JTP 294 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 121 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 294 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 294 bp overlap
ChIP fibroblast of lung ENCFF479BAW 294 bp overlap
ChIP hepatocyte ENCFF118DKH 284 bp overlap
ChIP hepatocyte ENCFF552DZB 294 bp overlap
ChIP keratinocyte ENCFF070STK 94 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 294 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 284 bp overlap
ChIP myotube ENCFF857GWB 294 bp overlap
ChIP neural cell ENCFF610EPB 294 bp overlap
ChIP neural cell ENCFF610EPB 186 bp overlap
ChIP neural progenitor cell ENCFF018MKA 294 bp overlap
ChIP neural progenitor cell ENCFF472NFV 294 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 154 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 278 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 294 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 294 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 252 bp overlap
HDAC2 1 dataset
ChIP VCaP_ETOH GSE28950.HDAC2.VCaP_ETOH 165 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 271 bp overlap
HNRNPLL 5 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 294 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 294 bp overlap
ChIP HepG2 ENCFF355PIC 294 bp overlap
ChIP HepG2 ENCFF952XAB 66 bp overlap
ChIP HepG2 ENCFF952XAB 294 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 277 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 294 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 141 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 294 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 81 bp overlap
KDM5A 1 dataset
ChIP T-47D_MK2206 GSE80593.KDM5A.T-47D_MK2206 131 bp overlap
KDM5B 3 datasets
ChIP MCF-7 GSE46055.KDM5B.MCF-7 196 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 231 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 113 bp overlap
KMT2A 2 datasets
ChIP SHI-1 GSE95511.KMT2A.SHI-1 135 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 225 bp overlap
MED1 1 dataset
ChIP MOLM-13 GSE154985.MED1.MOLM-13 246 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 235 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 246 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 225 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 253 bp overlap
PCGF2 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 294 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 294 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 112 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 226 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 285 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 294 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 294 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 283 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 209 bp overlap
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 203 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 294 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 244 bp overlap
RNF2 7 datasets
ChIP H1 ENCFF239FFS 294 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.RNF2.HEK293T_PCGF1356fl_OHT 166 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 145 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.RNF2.HEK293T_PCGF135fl_OHT 150 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 169 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 206 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 228 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 208 bp overlap
SMARCA4 5 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 238 bp overlap
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 294 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 87 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 160 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 273 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 291 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 213 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 248 bp overlap
SS18 3 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 253 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 242 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 108 bp overlap
STAT3 4 datasets
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 53 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 102 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 205 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 191 bp overlap
SUZ12 12 datasets
ChIP H1 ENCFF507HGF 263 bp overlap
ChIP H1 ENCFF881NFR 294 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 163 bp overlap
ChIP HEK293T_PCGF1352fl_OHT GSE119618.SUZ12.HEK293T_PCGF1352fl_OHT 79 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 198 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 208 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 294 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 206 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 294 bp overlap
ChIP NT2/D1 ENCFF574SXS 106 bp overlap
ChIP NT2/D1 ENCFF574SXS 294 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 210 bp overlap
TARDBP 1 dataset
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 210 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 294 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 165 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 258 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 294 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 294 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 275 bp overlap
ZFP36 1 dataset
ChIP Hep-G2 ENCSR382XLA.ZFP36.Hep-G2 110 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 158 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 186 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 289 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 163 bp overlap
ZNF737 1 dataset
ChIP Hep-G2 ENCSR127IHN.ZNF737.Hep-G2 181 bp overlap
ZNF800 1 dataset
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 175 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 149 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 246 bp overlap
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