chr20 : 10,466,511 10,466,711
200 bp 68 TFs 0 linked genes
This 200 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:10,461,511 – 10,471,711
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 200 bp overlap
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 200 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 200 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 200 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 200 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 200 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 200 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 172 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 200 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 163 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 96 bp overlap
CTCF 14 datasets
ChIP H9 ENCFF152GTF 194 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 134 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 101 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 127 bp overlap
ChIP endodermal cell ENCFF471YCZ 200 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 82 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 111 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 67 bp overlap
ChIP heart left ventricle ENCFF548XHH 200 bp overlap
ChIP heart left ventricle ENCFF769GAB 169 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 123 bp overlap
ChIP neural progenitor cell ENCFF420RBO 172 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 106 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 150 bp overlap
DPF2 2 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 200 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 155 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 191 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 67 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 142 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 93 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF939VKA 200 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 200 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 177 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 179 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 200 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 86 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 83 bp overlap
ChIP HepG2 ENCFF493GNS 141 bp overlap
ChIP HepG2 ENCFF826MXP 138 bp overlap
HSF1 1 dataset
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 121 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 200 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 164 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 200 bp overlap
KMT2C 2 datasets
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 179 bp overlap
KMT2D 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 200 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 200 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 199 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 187 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 200 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 131 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 146 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 200 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 129 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 104 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 200 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 200 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 179 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 200 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 181 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 200 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 192 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 64 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 200 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 150 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 200 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 199 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 200 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 64 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 200 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 191 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 64 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 200 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 101 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 200 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 143 bp overlap
ChIP liver ENCFF522JHE 200 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 200 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 200 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 196 bp overlap
RELA 4 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 95 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 95 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 52 bp overlap
REST 1 dataset
ChIP liver ENCSR893QWP.REST.liver 182 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 120 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 170 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 139 bp overlap
SMARCA2 6 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 194 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 200 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 200 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 194 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 200 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 200 bp overlap
SMARCA4 11 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 200 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 160 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 188 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 200 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 200 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 200 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 200 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 200 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 188 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 200 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 200 bp overlap
SMARCC1 7 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 200 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 154 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 135 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 164 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 200 bp overlap
SMC1 2 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 182 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 200 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 144 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 127 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 200 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 164 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 188 bp overlap
ChIP liver ENCFF769YSM 200 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 128 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 192 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 120 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 161 bp overlap
TAF1 2 datasets
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 111 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 135 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 132 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 142 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 155 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 135 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 200 bp overlap
TEAD4 7 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 200 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 187 bp overlap
ChIP H1 ENCFF778PAX 62 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 158 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 174 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 151 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 200 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 196 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 200 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 174 bp overlap