chr19 : 8,451,492 – 8,451,842
350 bp 76 TFs 2 linked genes
This 350 bp open chromatin element is linked to ENSG00000279827 and HNRNPM and is bound by 76 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000279827 5.9 kb Proximal Proximity
HNRNPM 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:8,446,492 – 8,456,842
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 226 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 350 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 177 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 89 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 89 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 181 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 181 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 263 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 185 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 185 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 105 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 201 bp overlap
CEBPA 3 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 184 bp overlap
ChIP HepG2 ENCFF175DFS 154 bp overlap
ChIP liver ERP002306.CEBPA.liver 143 bp overlap
CEBPB 5 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 190 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 116 bp overlap
ChIP HepG2 ENCFF074JWB 201 bp overlap
ChIP HepG2 ENCFF536NTI 219 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 275 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 105 bp overlap
ESR1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 100 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 350 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 68 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 110 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 53 bp overlap
ChIP DE DE-FOXA2-1 350 bp overlap
ChIP DE DE-FOXA2-2 188 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 56 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 222 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 350 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 113 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 350 bp overlap
ChIP DE DE-GATA6-2 350 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 350 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 73 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 326 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 238 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 245 bp overlap
HNF1B 2 datasets
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 131 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 248 bp overlap
HNF4A 4 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 298 bp overlap
ChIP HepG2 ENCFF146SSF 310 bp overlap
ChIP liver ENCFF354NRH 337 bp overlap
ChIP liver ENCFF449HPV 350 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 157 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 79 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 191 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 246 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 176 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 304 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 322 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 283 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 326 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 350 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 298 bp overlap
NR2F6 2 datasets
ChIP HepG2 ENCFF429VKC 341 bp overlap
ChIP HepG2 ENCFF514UJI 281 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 278 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 269 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 168 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 220 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 185 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 187 bp overlap
RAD51 1 dataset
ChIP K-562 ENCSR524BUE.RAD51.K-562 79 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 307 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 108 bp overlap
ChIP K562 ENCFF967GRF 129 bp overlap
ChIP K562 ENCFF967GRF 348 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 53 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 320 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 169 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 187 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 350 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 205 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 193 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 132 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 278 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 219 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 84 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 350 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 163 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 337 bp overlap
TFAP4 1 dataset
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 139 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 156 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 209 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 113 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 117 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 98 bp overlap
ZBTB7A 3 datasets
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF173BJH 193 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 135 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 265 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 331 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 204 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 279 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 258 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 163 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 231 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 224 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 83 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 177 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 174 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 131 bp overlap
ZNF550 1 dataset
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 252 bp overlap
ZNF598 1 dataset
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 252 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 164 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 101 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 225 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 278 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 206 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 70 bp overlap
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