chr18 : 29,862,775 29,863,123
348 bp 115 TFs 0 linked genes
This 348 bp open chromatin element has no linked target genes and is bound by 115 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:29,857,775 – 29,868,123
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 135 bp overlap
CEBPA 2 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 125 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 72 bp overlap
CEBPB 5 datasets
ChIP H1 ENCFF871PTR 104 bp overlap
ChIP HepG2 ENCFF536NTI 86 bp overlap
ChIP IMR-90 ENCFF468UGY 111 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 53 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 70 bp overlap
CEBPG 1 dataset
ChIP K-562 ENCSR490LWA.CEBPG.K-562 136 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 348 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF250ODG 187 bp overlap
ChIP BLaER1 ENCFF346MCV 184 bp overlap
ChIP BLaER1 ENCFF798NMV 162 bp overlap
DBP 1 dataset
Motif DE_12h DE_12h-DBP_MA0639.2 10 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 236 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 290 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
HLF 1 dataset
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HSF1 1 dataset
Motif ES_0h ES_0h-HSF1_MA0486.2 13 bp overlap
HSF4 1 dataset
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 186 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 202 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 295 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 263 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 189 bp overlap
ChIP H1 ENCFF747ZPQ 62 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 348 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 317 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 244 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 348 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 348 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 261 bp overlap
ChIP hESC GSE18292.NANOG.hESC 280 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 58 bp overlap
NFIL3 1 dataset
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 207 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 214 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NR1I3 2 datasets
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
NR6A1 2 datasets
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
Motif ES_0h ES_0h-NR6A1_MA1541.2 14 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 345 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 254 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 181 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RARA::RXRA 2 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Rarb 4 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 186 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 215 bp overlap
SOX14 1 dataset
Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 185 bp overlap
ChIP hESC GSE18292.SOX2.hESC 104 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 333 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 187 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 276 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 189 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 114 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 188 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 295 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 348 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 217 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 201 bp overlap
ZNF529 1 dataset
ChIP HEK293T GSE78099.ZNF529.HEK293T 199 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap