chr18 : 27,921,458 – 27,921,726
268 bp 55 TFs 1 linked gene
This 268 bp open chromatin element is linked to ENSG00000227279 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000227279 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:27,916,458 – 27,926,726
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 231 bp overlap
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 209 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 268 bp overlap
BRD2 19 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 251 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 268 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 268 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 268 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 268 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 211 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 211 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 267 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 267 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 162 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 162 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 268 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 111 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 267 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 91 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 161 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 154 bp overlap
ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 109 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 268 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 226 bp overlap
BRD4 22 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 81 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 256 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 268 bp overlap
ChIP Hep-G2 GSE123097.BRD4.Hep-G2 203 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 246 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 246 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 172 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 123 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 172 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 268 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 268 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 141 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 204 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 166 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 233 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 260 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 258 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 268 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 110 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 268 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 268 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 176 bp overlap
BRD7 1 dataset
ChIP SUM159PT_DMSO GSE131097.BRD7.SUM159PT_DMSO 234 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 110 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 157 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 182 bp overlap
CHD1 1 dataset
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 97 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 268 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 252 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 193 bp overlap
E2F1 3 datasets
ChIP HeLa GSE22478.E2F1.HeLa 184 bp overlap
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 237 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 213 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 268 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 114 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 261 bp overlap
ELL2 2 datasets
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 156 bp overlap
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 136 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 108 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 80 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 161 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 119 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 107 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 56 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 68 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 240 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 258 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 268 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 165 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 258 bp overlap
KLF4 2 datasets
ChIP PDAC GSE64557.KLF4.PDAC 268 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 135 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 268 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 93 bp overlap
MED26 3 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 232 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 181 bp overlap
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 136 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 88 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 229 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 200 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 67 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 175 bp overlap
PHIP 5 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 268 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 54 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 268 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 268 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 130 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 157 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 175 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 215 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 123 bp overlap
REST 11 datasets
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 120 bp overlap
ChIP HeLa-S3 ENCFF911DTC 235 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 250 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 140 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 204 bp overlap
ChIP SK-N-SH ENCFF635KBN 218 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 211 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 257 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 268 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 215 bp overlap
SFPQ 1 dataset
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 157 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 188 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 173 bp overlap
ChIP BT-16_NoDox GSE71504.SMARCA4.BT-16_NoDox 180 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 204 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 157 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 224 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 136 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 254 bp overlap
ChIP HeLa-S3 ENCFF992MML 168 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 186 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 97 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 97 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 268 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 64 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 123 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 268 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 268 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 97 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 53 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 175 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 268 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 65 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 246 bp overlap
ZNF777 1 dataset
ChIP HEK293 ENCSR295BIP.ZNF777.HEK293 73 bp overlap
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