chr18 : 11,823,081 11,823,838
757 bp 76 TFs 4 linked genes
This 757 bp open chromatin element is linked to 4 target genes and is bound by 76 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
CHMP1B 27.8 kb Distal Multiome
MPPE1 84.8 kb Distal Multiome
GNAL 134.3 kb Distal Multiome
IMPA2 157.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:11,818,081 – 11,828,838
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 62 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 79 bp overlap
BCL6 3 datasets
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
ChIP HepG2 ENCFF423EJH 247 bp overlap
BCL6B 2 datasets
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
BHLHE22 3 datasets
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP SW480 GSE110473.BRD4.SW480 246 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 202 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 555 bp overlap
ChIP K562 ENCFF673OEZ 328 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 103 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 185 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 239 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 573 bp overlap
ERF::NHLH1 3 datasets
Motif DE_48h DE_48h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_60h DE_60h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_72h DE_72h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 110 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 298 bp overlap
FERD3L 3 datasets
Motif DE_48h DE_48h-FERD3L_MA1485.1 14 bp overlap
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
Motif DE_72h DE_72h-FERD3L_MA1485.1 14 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 174 bp overlap
ChIP DE DE-FOXA2-1 708 bp overlap
ChIP DE DE-FOXA2-2 637 bp overlap
FOXH1 2 datasets
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 235 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 102 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 213 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 228 bp overlap
GATA2 2 datasets
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 185 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 757 bp overlap
ChIP DE DE-GATA4-2 757 bp overlap
ChIP foregut GSE117136.GATA4.foregut 378 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 133 bp overlap
ChIP DE DE-GATA6-1 739 bp overlap
ChIP DE DE-GATA6-2 757 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 757 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 757 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 757 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 757 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 757 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 757 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 174 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 757 bp overlap
ChIP foregut GSE117136.GATA6.foregut 363 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 303 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 358 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 336 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 141 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 336 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 244 bp overlap
ChIP K562 ENCFF968WBH 440 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 258 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 261 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 174 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 583 bp overlap
ChIP K562 ENCFF348IBL 353 bp overlap
ChIP K562 ENCFF771OHZ 246 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 757 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 295 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 757 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 757 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 408 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 278 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 318 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 333 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 757 bp overlap
KDM1A 6 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 265 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 175 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 243 bp overlap
ChIP K562 ENCFF128TYE 351 bp overlap
ChIP K562 ENCFF133OLU 427 bp overlap
ChIP K562 ENCFF133OLU 227 bp overlap
LEF1 2 datasets
ChIP K-562 ENCSR343ELW.LEF1.K-562 259 bp overlap
ChIP K562 ENCFF198WCP 169 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 220 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 228 bp overlap
NR6A1 1 dataset
Motif DE_60h DE_60h-NR6A1_MA1541.2 14 bp overlap
Neurod2 3 datasets
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 3 datasets
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PAX3 3 datasets
Motif DE_48h DE_48h-PAX3_MA1546.2 14 bp overlap
Motif DE_60h DE_60h-PAX3_MA1546.2 14 bp overlap
Motif DE_72h DE_72h-PAX3_MA1546.2 14 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 162 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 175 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 249 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 151 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 138 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 165 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 150 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000DOH.SIRT6.K-562 118 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 197 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 757 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 757 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 757 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 721 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 712 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 750 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 757 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 757 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 168 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 223 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 254 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 568 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 372 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 121 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 274 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 477 bp overlap
STAT1 2 datasets
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 151 bp overlap
ChIP K562 ENCFF226BTJ 297 bp overlap
Stat4 2 datasets
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
Stat5a 2 datasets
Motif DE_48h DE_48h-Stat5a_MA1624.2 9 bp overlap
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Stat5b 2 datasets
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 295 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 289 bp overlap
TAL1 4 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 155 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 141 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 204 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 162 bp overlap
ChIP K562 ENCFF319QZT 326 bp overlap
TCF7 3 datasets
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
ChIP K-562 ENCSR863KUB.TCF7.K-562 174 bp overlap
ChIP K562 ENCFF372PUR 283 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 4 datasets
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 137 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 177 bp overlap
ChIP hepatocellular-carcinoma-cell_420 GSE138781.TCF7L2.hepatocellular-carcinoma-cell_420 174 bp overlap
TFAP4 3 datasets
Motif DE_48h DE_48h-TFAP4_MA0691.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Motif DE_72h DE_72h-TFAP4_MA0691.1 10 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 200 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 202 bp overlap
Tcf12 3 datasets
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 3 datasets
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap