chr1 : 2,306,635 – 2,306,856

221 bp 71 TFs 1 linked gene

This 221 bp open chromatin element is linked to ENSG00000287356 and is bound by 71 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000287356		8.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

71 transcription factors

AGO2 2 datasets

ChIP HepG2 ENCFF252VFI 129 bp overlap

ChIP HepG2 ENCFF773YDL 129 bp overlap

AR 2 datasets

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 57 bp overlap

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 69 bp overlap

BCL11A 1 dataset

ChIP MCF-10A ERP003925.BCL11A.MCF-10A 220 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 221 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 221 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 221 bp overlap

BRD4 5 datasets

ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 78 bp overlap

ChIP COLO-741 GSE73319.BRD4.COLO-741 128 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 118 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 187 bp overlap

ChIP hESC GSE33281.BRD4.hESC 157 bp overlap

CDK9 1 dataset

ChIP HCT-116 GSE72622.CDK9.HCT-116 180 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 216 bp overlap

CTCF 8 datasets

ChIP A-673 ENCSR611JJS.CTCF.A-673 221 bp overlap

ChIP A673 ENCFF123WOM 221 bp overlap

ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 190 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 221 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 162 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 189 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 205 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 151 bp overlap

CTCFL 2 datasets

ChIP K-562 GSE70764.CTCFL.K-562 221 bp overlap

ChIP delta-47 GSE70764.CTCFL.delta-47 186 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 221 bp overlap

EGR1 1 dataset

ChIP WA01 ENCSR000BJA.EGR1.WA01 88 bp overlap

ELF1 1 dataset

ChIP ME-1 GSE46044.ELF1.ME-1 97 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000AUQ.EP300.WA01 183 bp overlap

ERG 3 datasets

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 221 bp overlap

ChIP K-562 GSE23730.ERG.K-562 168 bp overlap

ChIP K-562_DOX GSE23730.ERG.K-562_DOX 124 bp overlap

ESR1 2 datasets

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 104 bp overlap

ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 221 bp overlap

FOXK1 1 dataset

ChIP WTC11 ENCFF875IGU 171 bp overlap

GABPA 2 datasets

ChIP H1 ENCFF739QFD 221 bp overlap

ChIP WA01 ENCSR000BIW.GABPA.WA01 221 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 76 bp overlap

HMGXB4 1 dataset

ChIP WTC11 ENCFF962POR 54 bp overlap

HNRNPC 1 dataset

ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 175 bp overlap

HNRNPL 2 datasets

ChIP K-562 ENCSR594BNR.HNRNPL.K-562 84 bp overlap

ChIP K562 ENCFF779NTZ 182 bp overlap

HOXA3 1 dataset

ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 221 bp overlap

KDM4A 1 dataset

ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 153 bp overlap

KDM5B 1 dataset

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 148 bp overlap

KLF1 2 datasets

ChIP HEK293 GSE76494.KLF1.HEK293 100 bp overlap

ChIP HEK293 ENCSR859BMR.KLF1.HEK293 72 bp overlap

KLF12 1 dataset

ChIP HEK293 GSE76494.KLF12.HEK293 153 bp overlap

KLF15 1 dataset

ChIP HEK293 GSE76494.KLF15.HEK293 103 bp overlap

KLF3 1 dataset

ChIP keratinocyte GSE140991.KLF3.keratinocyte 214 bp overlap

KLF5 1 dataset

ChIP HEK293 GSE88976.KLF5.HEK293 185 bp overlap

KLF8 1 dataset

ChIP HEK293 ENCFF929IAJ 92 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 96 bp overlap

MAX 1 dataset

ChIP WTC11 ENCFF223QFY 221 bp overlap

MBD2 1 dataset

ChIP HeLa GSE41006.MBD2.HeLa 219 bp overlap

MED1 1 dataset

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 146 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 221 bp overlap

MYOCD 1 dataset

ChIP A-549 GSE128921.MYOCD.A-549 192 bp overlap

NANOG 2 datasets

ChIP WA01 ERP004238.NANOG.WA01 193 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 170 bp overlap

NCAPH2 1 dataset

ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 122 bp overlap

NELFE 1 dataset

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 169 bp overlap

NFKB1 2 datasets

ChIP HEK293T GSE129618.NFKB1.HEK293T 109 bp overlap

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 209 bp overlap

NR2F2 2 datasets

ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 221 bp overlap

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 221 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 221 bp overlap

POU2F1 1 dataset

ChIP T-47D GSE148277.POU2F1.T-47D 62 bp overlap

POU5F1 3 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 221 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 168 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 221 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 179 bp overlap

PRPF4 1 dataset

ChIP K562 ENCFF046WLD 201 bp overlap

RAD21 3 datasets

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 130 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 161 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap

RBM22 2 datasets

ChIP K-562 ENCSR848AOP.RBM22.K-562 221 bp overlap

ChIP K562 ENCFF420JDS 136 bp overlap

RUNX1 2 datasets

ChIP Jurkat GSE85524.RUNX1.Jurkat 216 bp overlap

ChIP ME-1 GSE46044.RUNX1.ME-1 220 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 203 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 221 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 160 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 221 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 221 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 165 bp overlap

SMARCB1 1 dataset

ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 92 bp overlap

SMC1 2 datasets

ChIP DKO GSE131606.SMC1.DKO 171 bp overlap

ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 134 bp overlap

SRF 1 dataset

ChIP WA01 ENCSR000BIV.SRF.WA01 199 bp overlap

SRSF3 2 datasets

ChIP K-562 ENCSR268QIQ.SRSF3.K-562 128 bp overlap

ChIP K-562 GSE120104.SRSF3.K-562 113 bp overlap

TBP 2 datasets

ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 221 bp overlap

ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 221 bp overlap

TCF7 1 dataset

ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 81 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 221 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 221 bp overlap

TP63 1 dataset

ChIP keratinocyte GSE33571.TP63.keratinocyte 185 bp overlap

TRIM24 1 dataset

ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 75 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 221 bp overlap

TRIM28 3 datasets

ChIP HCT-116 GSE72622.TRIM28.HCT-116 76 bp overlap

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 124 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 149 bp overlap

WDR5 1 dataset

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 221 bp overlap

YY1 1 dataset

ChIP Huh-7 GSE97411.YY1.Huh-7 221 bp overlap

ZBTB33 1 dataset

ChIP K562 ENCFF427SDV 221 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 168 bp overlap

ZHX1 1 dataset

ChIP HeLa-S3 ENCSR887MXT.ZHX1.HeLa-S3 156 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 190 bp overlap